Detail information of GWHGAAEX008867/evm.TU.scaffold_23.178
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695005836|ref|XP_009389382.1| | 1.68E-62 | PREDICTED: uncharacterized protein LOC103975956 [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|M0S6G8|M0S6G8_MUSAM | 6.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P09270_001} |
| TAIR | AT4G26210 | 2.00E-55 | Mitochondrial ATP synthase subunit G protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000025 | 4586062 | 4607725 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008867
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04718.14 | ATP-synt_G | 16 | 120 | 2.10E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02140 | ATPeFG, ATP5L, ATP20 | Metabolic pathways | map01100 |
| Oxidative phosphorylation | map00190 | ||
| Thermogenesis | map04714 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015986 | Biological Process | ATP synthesis coupled proton transport |
| GO:0015078 | Molecular Function | hydrogen ion transmembrane transporter activity |
| GO:0000276 | Cellular Component | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.280 |
| SRR2545915 | Juvenile tuber | 41.610 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 41.460 |
| SRR5643514 | five period of Gastrodia elata | 52.610 | |
| SRR5643515 | five period of Gastrodia elata | 45.070 | |
| SRR5643524 | five period of Gastrodia elata | 46.380 | |
| SRR5643525 | five period of Gastrodia elata | 29.360 | |
| SRR5643528 | five period of Gastrodia elata | 34.170 | |
| SRR5643658 | five period of Gastrodia elata | 30.780 | |
| SRR5643659 | five period of Gastrodia elata | 56.210 | |
| SRR5643660 | five period of Gastrodia elata | 48.850 | |
| SRR5643661 | five period of Gastrodia elata | 53.960 | |
| SRR5643662 | five period of Gastrodia elata | 54.700 | |
| SRR5643663 | five period of Gastrodia elata | 52.960 | |
| SRR5643664 | five period of Gastrodia elata | 42.320 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.430 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 52.410 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 27.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 32.180 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 36.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 37.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 55.910 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 50.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 61.720 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 61.720 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 48.17 |
| Juven | Juvenile tuber | 22.51 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.69 | |
| Mother_Juven | Mother tuber of Juvenile | 15.20 |