Detail information of GWHGAAEX008872/evm.TU.scaffold_23.184


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28844.00E-15926S proteasome regulatory complex, subunit RPN10/PSMD4
nrgi|743779368|ref|XP_010920149.1|0PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Elaeis guineensis]
Swissprottr|P55034|PSMD4_ARATH1.00E-15926S proteasome non-ATPase regulatory subunit 4 homolog
trEMBLtr|I1JCF9|I1JCF9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G05250.1}
TAIRAT4G386304.00E-159regulatory particle non-ATPase 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002547218364742483+
Transcript Sequence

Network for GWHGAAEX008872

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13519.5VWA_261158.90E-27
PF02809.19UIM2242370.55
PF02809.19UIM2963070.75
PF02809.19UIM3263400.023
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03029PSMD4, RPN10 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms115.930
SRR2545915Juvenile tuber116.540
SRP108465SRR5643513five period of Gastrodia elata116.540
SRR5643514five period of Gastrodia elata125.890
SRR5643515five period of Gastrodia elata120.110
SRR5643524five period of Gastrodia elata131.830
SRR5643525five period of Gastrodia elata110.970
SRR5643528five period of Gastrodia elata119.420
SRR5643658five period of Gastrodia elata114.180
SRR5643659five period of Gastrodia elata98.430
SRR5643660five period of Gastrodia elata100.160
SRR5643661five period of Gastrodia elata97.170
SRR5643662five period of Gastrodia elata115.490
SRR5643663five period of Gastrodia elata103.870
SRR5643664five period of Gastrodia elata101.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1111.620
SRR6049655Rhizomagastrodiae_C368-T10_good_178.990
SRR6049656Rhizomagastrodiae_C368-T07_good_1111.650
SRR6049657Rhizomagastrodiae_C368-T07_good_1108.480
SRR6049658Rhizomagastrodiae_C368-T04_good_1123.050
SRR6049659Rhizomagastrodiae_C368-T04_good_1136.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1113.300
SRR6049661Rhizomagastrodiae_C368-T04_good_1122.220
SRR6049662Rhizomagastrodiae_C368-T01_good_1113.970
SRR6049663Rhizomagastrodiae_C368-T01_good_1115.600
SRR6049664Rhizomagastrodiae_C368-T10_good_1120.070
SRR6049665Rhizomagastrodiae_C368-T10_good_1120.070
SRP279888GastroGastrodia elata tuber 130.21
JuvenJuvenile tuber205.90
Mother_GastroMother tuber of Gastrodia elata 145.09
Mother_JuvenMother tuber of Juvenile 190.20