Detail information of GWHGAAEX008877/evm.TU.scaffold_23.189


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23911.00E-135Vacuolar sorting protein/ubiquitin receptor VPS23
nrgi|672143186|ref|XP_008795463.1|1.47E-168PREDICTED: protein ELC-like [Phoenix dactylifera]
Swissprottr|Q9FFY6|ELCL_ARATH4.00E-136Protein ELC-like
trEMBLtr|M0RQ57|M0RQ57_MUSAM2.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P07270_001}
TAIRAT5G138601.00E-135ELCH-like

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002548639214879063-
Transcript Sequence

Network for GWHGAAEX008877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05743.12UEV451651.30E-37
PF09454.9Vps23_core2963561.40E-22
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K12183TSG101, STP22, VPS23 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport
GO:0006464Biological Processcellular protein modification process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.980
SRR2545915Juvenile tuber32.850
SRP108465SRR5643513five period of Gastrodia elata44.050
SRR5643514five period of Gastrodia elata37.330
SRR5643515five period of Gastrodia elata49.210
SRR5643524five period of Gastrodia elata38.140
SRR5643525five period of Gastrodia elata59.890
SRR5643528five period of Gastrodia elata61.820
SRR5643658five period of Gastrodia elata53.590
SRR5643659five period of Gastrodia elata48.790
SRR5643660five period of Gastrodia elata52.730
SRR5643661five period of Gastrodia elata54.430
SRR5643662five period of Gastrodia elata61.740
SRR5643663five period of Gastrodia elata55.000
SRR5643664five period of Gastrodia elata71.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.260
SRR6049655Rhizomagastrodiae_C368-T10_good_151.460
SRR6049656Rhizomagastrodiae_C368-T07_good_129.380
SRR6049657Rhizomagastrodiae_C368-T07_good_127.800
SRR6049658Rhizomagastrodiae_C368-T04_good_127.160
SRR6049659Rhizomagastrodiae_C368-T04_good_130.260
SRR6049660Rhizomagastrodiae_C368-T01_good_128.070
SRR6049661Rhizomagastrodiae_C368-T04_good_125.550
SRR6049662Rhizomagastrodiae_C368-T01_good_129.460
SRR6049663Rhizomagastrodiae_C368-T01_good_130.040
SRR6049664Rhizomagastrodiae_C368-T10_good_134.200
SRR6049665Rhizomagastrodiae_C368-T10_good_134.200
SRP279888GastroGastrodia elata tuber 46.13
JuvenJuvenile tuber47.25
Mother_GastroMother tuber of Gastrodia elata 54.46
Mother_JuvenMother tuber of Juvenile 60.43