Detail information of GWHGAAEX008883/evm.TU.scaffold_23.195


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|384216662|ref|YP_005607828.1|2.00E-152malic enzyme [Bradyrhizobium japonicum USDA 6]
KOGKOG12570NADP+-dependent malic enzyme
nrgi|743776246|ref|XP_010918525.1|0PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|P37225|MAON_SOLTU0NAD-dependent malic enzyme 59 kDa isoform, mitochondrial (Precursor)
trEMBLtr|M0RVS9|M0RVS9_MUSAM0Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIRAT4G005700NAD-dependent malic enzyme 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002549918865040924+
Transcript Sequence

Network for GWHGAAEX008883

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.18malic892691.60E-74
PF03949.14Malic_M2795456.30E-90
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00028E1.1.1.39 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004470Molecular Functionmalic enzyme activity
GO:0004471Molecular Functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0051287Molecular FunctionNAD binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.720
SRR2545915Juvenile tuber78.260
SRP108465SRR5643513five period of Gastrodia elata72.200
SRR5643514five period of Gastrodia elata82.350
SRR5643515five period of Gastrodia elata69.510
SRR5643524five period of Gastrodia elata83.580
SRR5643525five period of Gastrodia elata41.100
SRR5643528five period of Gastrodia elata42.590
SRR5643658five period of Gastrodia elata37.760
SRR5643659five period of Gastrodia elata64.750
SRR5643660five period of Gastrodia elata57.950
SRR5643661five period of Gastrodia elata60.140
SRR5643662five period of Gastrodia elata50.470
SRR5643663five period of Gastrodia elata56.520
SRR5643664five period of Gastrodia elata57.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.230
SRR6049655Rhizomagastrodiae_C368-T10_good_151.540
SRR6049656Rhizomagastrodiae_C368-T07_good_172.740
SRR6049657Rhizomagastrodiae_C368-T07_good_171.480
SRR6049658Rhizomagastrodiae_C368-T04_good_169.140
SRR6049659Rhizomagastrodiae_C368-T04_good_169.820
SRR6049660Rhizomagastrodiae_C368-T01_good_171.770
SRR6049661Rhizomagastrodiae_C368-T04_good_171.000
SRR6049662Rhizomagastrodiae_C368-T01_good_185.120
SRR6049663Rhizomagastrodiae_C368-T01_good_170.260
SRR6049664Rhizomagastrodiae_C368-T10_good_165.390
SRR6049665Rhizomagastrodiae_C368-T10_good_165.390
SRP279888GastroGastrodia elata tuber 85.27
JuvenJuvenile tuber87.77
Mother_GastroMother tuber of Gastrodia elata 48.38
Mother_JuvenMother tuber of Juvenile 67.89