Detail information of GWHGAAEX008890/evm.TU.scaffold_23.201
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|296134327|ref|YP_003641574.1| | 2.00E-06 | hypothetical protein TherJR_2841 [Thermincola potens JR] |
| KOG | KOG2647 | 7.00E-146 | Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase |
| nr | gi|743839372|ref|XP_010936984.1| | 0 | PREDICTED: GPI mannosyltransferase 2 [Elaeis guineensis] |
| trEMBL | tr|D7SLG2|D7SLG2_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI16490.3} |
| TAIR | AT1G11880 | 7.00E-146 | transferases, transferring hexosyl groups |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000025 | 5134820 | 5152047 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008890
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04188.12 | Mannosyl_trans2 | 43 | 504 | 2.50E-115 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT76 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07542 | PIGV | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0004584 | Molecular Function | dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 28.370 |
| SRR2545915 | Juvenile tuber | 19.410 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.250 |
| SRR5643514 | five period of Gastrodia elata | 14.080 | |
| SRR5643515 | five period of Gastrodia elata | 12.880 | |
| SRR5643524 | five period of Gastrodia elata | 13.740 | |
| SRR5643525 | five period of Gastrodia elata | 13.080 | |
| SRR5643528 | five period of Gastrodia elata | 8.890 | |
| SRR5643658 | five period of Gastrodia elata | 14.130 | |
| SRR5643659 | five period of Gastrodia elata | 11.310 | |
| SRR5643660 | five period of Gastrodia elata | 11.650 | |
| SRR5643661 | five period of Gastrodia elata | 12.010 | |
| SRR5643662 | five period of Gastrodia elata | 11.820 | |
| SRR5643663 | five period of Gastrodia elata | 12.470 | |
| SRR5643664 | five period of Gastrodia elata | 10.270 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.030 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.020 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.250 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.250 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.08 |
| Juven | Juvenile tuber | 18.55 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.16 | |
| Mother_Juven | Mother tuber of Juvenile | 13.49 |