Gene detail

Detail information of GWHGAAEX008895/evm.TU.scaffold_23.206

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|113476999\|ref\|YP_723060.1\|	7.00E-07	peptidase-like protein [Trichodesmium erythraeum IMS101]
KOG	KOG1840	3.00E-124	Kinesin light chain
nr	gi\|743864430\|ref\|XP_010904580.1\|	2.30E-174	PREDICTED: uncharacterized protein LOC105031972 [Elaeis guineensis]
trEMBL	tr\|M0U2W4\|M0U2W4_MUSAM	2.00E-156	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P23570_001}
TAIR	AT2G31240	3.00E-124	Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	5190151	5199221	-

Transcript Sequence
>GWHTAAEX008895 CTTAAATCCTAATCATCTATATTTTTTCGGAGATATTTGGGAGCTAATTAATATTTTTTAAAAAAAAAACTTCATTGCCGTTTTTTCCAACAGAAATTACCGATCTGGGTTCTAGGGTTCGGGGCTCTCGTCGTCTTCGGCGGCTATGTCGCCACTGGACGATCTCTTCCGCTGTCCTCTTCTCCTTTTCTTTCTCGATGGCGTCCTATAATACTGTTGCTTTTTTCGCTCGTGGAAGGATCTTTTTTCGCCAGTTTCGCCCAGAGCAGCTGATTTTATACTCTAGTTTCTTCCGCCGGTGAATGGCTTGGTTTCGGTGTGTACAGATCTGACGGCTAAAGATGTGAAGCTTGGATTACAGGGCATTTCATTTTTGGTCTTAATGATTCGTATTATTTAAAAAATTGTTCCCCCAATTTGTTAGCTTTGTCATAACACTTGGCATGGCAACCTTTTCTATTGATTTTACCAGATTAACTTTATCATTTCTAATCTACAGATCTTGCGAATGCTTTTTTAATTGTAGTAGTTTTAAGCTATAGTTTCTTCACAGTGCTGCTACCACATAATCCATTAGACGTATCTTGATTTCTATTGCCATGAGAAGAGCCTTCTCATCCTTTTTCCTACCCAGAATTAGCTGTGCTAAACTCTTTCCTAGAAATGCCATTTTTTTCTTACCCTCAAACCAATCTTCCCGAAGCTTTCACCCTAAATATTCTCCAGATGCAAAATATTATTTTTTTTCCACCCTAAATCCCAAACTTGGACATAACCTACCAACTGAACCTGAAAAATTTCTCAGCTTTTCCAGCACTATCGAGGAACTTATGGCCTCCTTCAAAGCATTTGAGGACTCTTTTAGCAAAAATGACAAGAAGTTAGGAGAAATCTGTTTGAAAGTGGGAGAGGTTTTGCTTTCAAAAGCTCCTAAAGATCTGGAGAAGGCCCTTAGCTTTGTTGTTAGGGCGTTGGAGATATTGGAAAAATATGATGGGGGAACATCTCTTCCATTGGTGAAAGCATTGCGCCTTGTTGGTTCAATAAGCTGCAAGATGAATAAACTTGATGATAGTCTGGACTCCTTGGAAATTGCATGCCAAATTTTGGGTAGCTTGGAAGAGGAGGGATTTTGTGGTATAGAATTTGATTCTGAGAAAGTTTCCATTCATCTTGAGCTTGCAAACACAAAGAATGCCATGGGCCGGAGGTGGGAGGCTGTGATTGACCTTCAAAGATCCTTGCAGATGCGCATGTTGATTCTAGAGCCTGATAGTCTTGAGCTAGCTTTGGCTTGTAAGGATGTGGCTGAGGCCTATGCTGGGGTTTTGAAGTTTAATGAGGCACGACCATTGTGCTTGAAGGCATTGGAGATCTTTGAGGCAAAAATAGGTAAGAAATGTGAGGAAGCTATTCAAGTTCGGCAGCTTCTTGGGGCTATTTACGTTGGGCTTGAGGAAAATGAGGAGGCATTGGCACAGAATGAGTTGTGTCGAGGAATATTACTTGGTTTGAATATGGAAGCTGAGATTCTCAACATGGAAATTGAAGCAGCTAACATACAAATTAATCTCGGTAGATTAGGTGAGGCAATGAGCACCCTCAAAGGGGTGATCCAAAAGGCTGGAAAGGAGAGTGAGATAAGAGCTTTTGCTTTTGTTTCTATGGCAAAAATTTTGTACTTTCAGGAGAGGTTTGGAGACTCGAAAGGGTGTTTGGTTATGACCTGTGATATTCTGAATAAAGTTGGTTCAGCATCATCTGAAAAAATTACGGATGCATTATTAGAAATTTCTATGTTGTATGAGATGATGAATGAGTTTGAAACTGCTATATGTTTAATGAAGAGAACACTTTCAGTGATTGAAAAGAATCCTCAAGAGCAATTTATGATGGGGAGCATTTTTGCAAGGATGGGCTGGTTGTTTCTCTTGATCGGTAATGTTCAGCAAGCTGTGCCATCTCTTGAGAATGCAATATCAAAGCTGAAGAATAGCTTTGGACCTAAACATTTTGGCTTGGGATTTGCTTATAAACATTTAGGGCAAGCATATTTAGAGATTAACAAGGCTCAGTCGGCCATACAGATGCTTTTGCTGGCTAAAGACATCATTGAAGCCTCTTTTGGGCTGCAGCATGAGGATTCCATTGATACATGTCAGTGCATTGCTAATGCATACGGAATTATGGGAAAGTATATTTTATTTAAACTTCCAATTAGTTTTCCAATTTTTTAAGCAATTTCATCATCCTTAAAATTAGTTGACAACTTATATAAATCACTTATTATGTACCTTGTTATCATGATGCTTTCGTTATCAGCATATTGGCAGTTAGGATAGTAATCTAGATTGTGCTCAAGGATTTTCCCATTTTACTTGTACCGAAATATGCTAATTACATTTCTCATCTTGATGTGCTAAATAGGCTTGATGATAATTTTAGAAGTCAAGTGACATGTATATCAATGTATTATCTTTTCTTTTATGCATGGTTTAAATTAAATTAATGCGGAATGTACCTTTTTAAGTACCTTTTGGTTATTCTCAATCTTATGTTGATGAATGCATATTTCATATATCTGTTGCATGCAATCAAAGTCGCTCATTGCCTCTCAATGTGCTTCAGATTGAAGTCTTGAGTGTCACAAACCATTATGCTCTGCATGTTAATCCTCTTTCAATTGCCATTTTCATCTATCAATGTCAAGAAACATGTCGAGTCTTTATGTTGGATTAAGCTCCTCTATGCAGAGCAGCTCGATTCTGCATTCATCATCGGTCCACATTGCCTCTAAT

Network for GWHGAAEX008895

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.690
SRP064423	SRR2545915	Juvenile tuber	5.510
SRP108465	SRR5643513	five period of Gastrodia elata	5.410
	SRR5643514	five period of Gastrodia elata	4.600
	SRR5643515	five period of Gastrodia elata	4.790
	SRR5643524	five period of Gastrodia elata	5.450
	SRR5643525	five period of Gastrodia elata	9.240
	SRR5643528	five period of Gastrodia elata	7.310
	SRR5643658	five period of Gastrodia elata	5.590
	SRR5643659	five period of Gastrodia elata	7.780
	SRR5643660	five period of Gastrodia elata	6.970
	SRR5643661	five period of Gastrodia elata	6.020
	SRR5643662	five period of Gastrodia elata	9.150
	SRR5643663	five period of Gastrodia elata	7.690
	SRR5643664	five period of Gastrodia elata	6.270
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.160
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.250
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.740
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.020
SRP279888	Gastro	Gastrodia elata tuber	5.63
	Juven	Juvenile tuber	4.61
	Mother_Gastro	Mother tuber of Gastrodia elata	7.42
	Mother_Juven	Mother tuber of Juvenile	5.01