Detail information of GWHGAAEX008899/evm.TU.scaffold_23.210


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07970Actin-related protein
nrgi|743864391|ref|XP_010904571.1|0PREDICTED: actin-related protein 9 isoform X1 [Elaeis guineensis]
Swissprottr|A2XQX0|ARP9_ORYSI0Actin-related protein 9
trEMBLtr|M0SIL0|M0SIL0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P28440_001}
TAIRAT5G435000actin-related protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002552404415322953+
Transcript Sequence

Network for GWHGAAEX008899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00022.18Actin415692.10E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.280
SRR2545915Juvenile tuber27.990
SRP108465SRR5643513five period of Gastrodia elata33.540
SRR5643514five period of Gastrodia elata33.300
SRR5643515five period of Gastrodia elata31.310
SRR5643524five period of Gastrodia elata30.620
SRR5643525five period of Gastrodia elata29.880
SRR5643528five period of Gastrodia elata18.870
SRR5643658five period of Gastrodia elata29.180
SRR5643659five period of Gastrodia elata29.710
SRR5643660five period of Gastrodia elata29.290
SRR5643661five period of Gastrodia elata25.760
SRR5643662five period of Gastrodia elata23.350
SRR5643663five period of Gastrodia elata24.960
SRR5643664five period of Gastrodia elata28.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.560
SRR6049655Rhizomagastrodiae_C368-T10_good_130.700
SRR6049656Rhizomagastrodiae_C368-T07_good_128.510
SRR6049657Rhizomagastrodiae_C368-T07_good_140.470
SRR6049658Rhizomagastrodiae_C368-T04_good_127.610
SRR6049659Rhizomagastrodiae_C368-T04_good_131.240
SRR6049660Rhizomagastrodiae_C368-T01_good_131.830
SRR6049661Rhizomagastrodiae_C368-T04_good_126.730
SRR6049662Rhizomagastrodiae_C368-T01_good_124.500
SRR6049663Rhizomagastrodiae_C368-T01_good_124.370
SRR6049664Rhizomagastrodiae_C368-T10_good_125.610
SRR6049665Rhizomagastrodiae_C368-T10_good_125.610
SRP279888GastroGastrodia elata tuber 19.47
JuvenJuvenile tuber29.82
Mother_GastroMother tuber of Gastrodia elata 17.79
Mother_JuvenMother tuber of Juvenile 23.35