Detail information of GWHGAAEX008916/evm.TU.scaffold_23.230


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108803345|ref|YP_643282.1|2.00E-29serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00324.00E-174Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|425896519|gb|AFY10518.1|0calcium dependent protein kinase 32 [Dendrobium catenatum]
Swissprottr|Q9SJ61|CDPKP_ARATH3.00E-95Calcium-dependent protein kinase 25
trEMBLtr|T1QDJ7|T1QDJ7_9ASPA0Calcium dependent protein kinase 32 {ECO:0000313|EMBL:AFY10518.1}
TAIRAT1G125804.00E-174phosphoenolpyruvate carboxylase-related kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002556194145622103+
Transcript Sequence

Network for GWHGAAEX008916

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase352938.20E-70
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.890
SRR2545915Juvenile tuber7.080
SRP108465SRR5643513five period of Gastrodia elata35.800
SRR5643514five period of Gastrodia elata33.210
SRR5643515five period of Gastrodia elata14.430
SRR5643524five period of Gastrodia elata21.560
SRR5643525five period of Gastrodia elata9.010
SRR5643528five period of Gastrodia elata7.950
SRR5643658five period of Gastrodia elata8.230
SRR5643659five period of Gastrodia elata13.840
SRR5643660five period of Gastrodia elata15.470
SRR5643661five period of Gastrodia elata16.230
SRR5643662five period of Gastrodia elata19.780
SRR5643663five period of Gastrodia elata19.810
SRR5643664five period of Gastrodia elata17.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.270
SRR6049655Rhizomagastrodiae_C368-T10_good_131.190
SRR6049656Rhizomagastrodiae_C368-T07_good_133.210
SRR6049657Rhizomagastrodiae_C368-T07_good_120.230
SRR6049658Rhizomagastrodiae_C368-T04_good_123.390
SRR6049659Rhizomagastrodiae_C368-T04_good_119.430
SRR6049660Rhizomagastrodiae_C368-T01_good_122.420
SRR6049661Rhizomagastrodiae_C368-T04_good_116.200
SRR6049662Rhizomagastrodiae_C368-T01_good_126.200
SRR6049663Rhizomagastrodiae_C368-T01_good_125.480
SRR6049664Rhizomagastrodiae_C368-T10_good_150.460
SRR6049665Rhizomagastrodiae_C368-T10_good_150.460
SRP279888GastroGastrodia elata tuber 27.48
JuvenJuvenile tuber38.99
Mother_GastroMother tuber of Gastrodia elata 14.37
Mother_JuvenMother tuber of Juvenile 18.56