Detail information of GWHGAAEX008924/evm.TU.scaffold_23.237


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743828361|ref|XP_010933841.1|2.31E-60PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8LAP8|DOF46_ARATH8.00E-41Dof zinc finger protein DOF4.6
trEMBLtr|V7ASA7|V7ASA7_PHAVU3.00E-57Uncharacterized protein {ECO:0000313|EMBL:ESW08459.1}
TAIRAT4G240602.00E-39Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002557028995704650+
Transcript Sequence

Network for GWHGAAEX008924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof41971.70E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms132.770
SRR2545915Juvenile tuber129.880
SRP108465SRR5643513five period of Gastrodia elata69.200
SRR5643514five period of Gastrodia elata75.560
SRR5643515five period of Gastrodia elata53.800
SRR5643524five period of Gastrodia elata53.700
SRR5643525five period of Gastrodia elata351.120
SRR5643528five period of Gastrodia elata126.010
SRR5643658five period of Gastrodia elata322.260
SRR5643659five period of Gastrodia elata163.860
SRR5643660five period of Gastrodia elata218.660
SRR5643661five period of Gastrodia elata168.480
SRR5643662five period of Gastrodia elata355.380
SRR5643663five period of Gastrodia elata340.700
SRR5643664five period of Gastrodia elata555.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_194.820
SRR6049655Rhizomagastrodiae_C368-T10_good_169.500
SRR6049656Rhizomagastrodiae_C368-T07_good_173.920
SRR6049657Rhizomagastrodiae_C368-T07_good_195.640
SRR6049658Rhizomagastrodiae_C368-T04_good_188.250
SRR6049659Rhizomagastrodiae_C368-T04_good_1100.460
SRR6049660Rhizomagastrodiae_C368-T01_good_185.020
SRR6049661Rhizomagastrodiae_C368-T04_good_158.380
SRR6049662Rhizomagastrodiae_C368-T01_good_165.380
SRR6049663Rhizomagastrodiae_C368-T01_good_188.170
SRR6049664Rhizomagastrodiae_C368-T10_good_173.150
SRR6049665Rhizomagastrodiae_C368-T10_good_173.150
SRP279888GastroGastrodia elata tuber 281.56
JuvenJuvenile tuber49.30
Mother_GastroMother tuber of Gastrodia elata 35.46
Mother_JuvenMother tuber of Juvenile 12.69