Detail information of GWHGAAEX008925/evm.TU.scaffold_23.238


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33191.00E-93Predicted membrane protein
nrgi|720036927|ref|XP_010267515.1|8.89E-102PREDICTED: ORM1-like protein 3 [Nelumbo nucifera]
trEMBLtr|A0A0A0L3T2|A0A0A0L3T2_CUCSA8.00E-100Uncharacterized protein {ECO:0000313|EMBL:KGN56408.1}
TAIRAT1G012301.00E-93ORMDL family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002557253065759466-
Transcript Sequence

Network for GWHGAAEX008925

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04061.13ORMDL151498.40E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms148.840
SRR2545915Juvenile tuber116.620
SRP108465SRR5643513five period of Gastrodia elata90.060
SRR5643514five period of Gastrodia elata70.580
SRR5643515five period of Gastrodia elata110.470
SRR5643524five period of Gastrodia elata89.430
SRR5643525five period of Gastrodia elata179.330
SRR5643528five period of Gastrodia elata162.440
SRR5643658five period of Gastrodia elata123.730
SRR5643659five period of Gastrodia elata111.370
SRR5643660five period of Gastrodia elata116.700
SRR5643661five period of Gastrodia elata144.180
SRR5643662five period of Gastrodia elata166.370
SRR5643663five period of Gastrodia elata134.930
SRR5643664five period of Gastrodia elata136.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.680
SRR6049655Rhizomagastrodiae_C368-T10_good_171.950
SRR6049656Rhizomagastrodiae_C368-T07_good_170.590
SRR6049657Rhizomagastrodiae_C368-T07_good_197.810
SRR6049658Rhizomagastrodiae_C368-T04_good_1105.530
SRR6049659Rhizomagastrodiae_C368-T04_good_1144.090
SRR6049660Rhizomagastrodiae_C368-T01_good_194.380
SRR6049661Rhizomagastrodiae_C368-T04_good_1107.050
SRR6049662Rhizomagastrodiae_C368-T01_good_173.190
SRR6049663Rhizomagastrodiae_C368-T01_good_173.500
SRR6049664Rhizomagastrodiae_C368-T10_good_172.820
SRR6049665Rhizomagastrodiae_C368-T10_good_172.820
SRP279888GastroGastrodia elata tuber 155.36
JuvenJuvenile tuber78.57
Mother_GastroMother tuber of Gastrodia elata 252.45
Mother_JuvenMother tuber of Juvenile 232.92