Detail information of GWHGAAEX008931/evm.TU.scaffold_23.244


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186681873|ref|YP_001865069.1|3.00E-09hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
KOGKOG10070WD repeat protein TSSC1, WD repeat superfamily
nrgi|672116202|ref|XP_008781258.1|0PREDICTED: WD repeat-containing protein DWA2 isoform X1 [Phoenix dactylifera]
Swissprottr|Q6NPN9|DWA2_ARATH1.00E-171WD repeat-containing protein DWA2
trEMBLtr|M0RQ54|M0RQ54_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P07240_001}
TAIRAT1G205400Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002558054575820050+
Transcript Sequence

Network for GWHGAAEX008931

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.390
SRR2545915Juvenile tuber29.200
SRP108465SRR5643513five period of Gastrodia elata35.020
SRR5643514five period of Gastrodia elata42.640
SRR5643515five period of Gastrodia elata37.030
SRR5643524five period of Gastrodia elata41.440
SRR5643525five period of Gastrodia elata23.430
SRR5643528five period of Gastrodia elata25.270
SRR5643658five period of Gastrodia elata22.740
SRR5643659five period of Gastrodia elata43.230
SRR5643660five period of Gastrodia elata42.440
SRR5643661five period of Gastrodia elata41.930
SRR5643662five period of Gastrodia elata32.750
SRR5643663five period of Gastrodia elata38.490
SRR5643664five period of Gastrodia elata30.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.540
SRR6049655Rhizomagastrodiae_C368-T10_good_149.930
SRR6049656Rhizomagastrodiae_C368-T07_good_140.450
SRR6049657Rhizomagastrodiae_C368-T07_good_135.390
SRR6049658Rhizomagastrodiae_C368-T04_good_129.610
SRR6049659Rhizomagastrodiae_C368-T04_good_127.760
SRR6049660Rhizomagastrodiae_C368-T01_good_133.250
SRR6049661Rhizomagastrodiae_C368-T04_good_131.040
SRR6049662Rhizomagastrodiae_C368-T01_good_140.920
SRR6049663Rhizomagastrodiae_C368-T01_good_141.080
SRR6049664Rhizomagastrodiae_C368-T10_good_145.750
SRR6049665Rhizomagastrodiae_C368-T10_good_145.750
SRP279888GastroGastrodia elata tuber 41.79
JuvenJuvenile tuber42.13
Mother_GastroMother tuber of Gastrodia elata 39.33
Mother_JuvenMother tuber of Juvenile 38.70