Detail information of GWHGAAEX008942/evm.TU.scaffold_23.256


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|674237749|gb|KFK30514.1|8.55E-18hypothetical protein AALP_AA7G272200 [Arabis alpina]
trEMBLtr|M0ZT67|M0ZT67_SOLTU2.00E-18Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400007561}
TAIRAT2G266802.00E-18Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002560738826078535-
Transcript Sequence

Network for GWHGAAEX008942

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00319.17SRF-TF2371.40E-06
PF05050.11Methyltransf_21861420.00078
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMADS-M-type

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.170
SRR2545915Juvenile tuber12.120
SRP108465SRR5643513five period of Gastrodia elata6.480
SRR5643514five period of Gastrodia elata10.190
SRR5643515five period of Gastrodia elata8.820
SRR5643524five period of Gastrodia elata7.700
SRR5643525five period of Gastrodia elata8.540
SRR5643528five period of Gastrodia elata13.910
SRR5643658five period of Gastrodia elata10.500
SRR5643659five period of Gastrodia elata7.270
SRR5643660five period of Gastrodia elata10.710
SRR5643661five period of Gastrodia elata5.200
SRR5643662five period of Gastrodia elata10.480
SRR5643663five period of Gastrodia elata6.760
SRR5643664five period of Gastrodia elata8.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.020
SRR6049655Rhizomagastrodiae_C368-T10_good_127.710
SRR6049656Rhizomagastrodiae_C368-T07_good_16.770
SRR6049657Rhizomagastrodiae_C368-T07_good_17.700
SRR6049658Rhizomagastrodiae_C368-T04_good_17.760
SRR6049659Rhizomagastrodiae_C368-T04_good_110.690
SRR6049660Rhizomagastrodiae_C368-T01_good_110.370
SRR6049661Rhizomagastrodiae_C368-T04_good_18.160
SRR6049662Rhizomagastrodiae_C368-T01_good_19.400
SRR6049663Rhizomagastrodiae_C368-T01_good_17.280
SRR6049664Rhizomagastrodiae_C368-T10_good_16.800
SRR6049665Rhizomagastrodiae_C368-T10_good_16.800
SRP279888GastroGastrodia elata tuber 6.31
JuvenJuvenile tuber6.09
Mother_GastroMother tuber of Gastrodia elata 11.75
Mother_JuvenMother tuber of Juvenile 6.98