Detail information of GWHGAAEX008952/evm.TU.scaffold_23.268


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46294.00E-25Predicted mechanosensitive ion channel
nrgi|743854101|ref|XP_010940812.1|5.32E-37PREDICTED: mechanosensitive ion channel protein 10-like isoform X2 [Elaeis guineensis]
Swissprottr|Q9LYG9|MSL10_ARATH1.00E-25Mechanosensitive ion channel protein 10
trEMBLtr|A0A0A0LHK4|A0A0A0LHK4_CUCSA6.00E-33Uncharacterized protein {ECO:0000313|EMBL:KGN61410.1}
TAIRAT5G120804.00E-25mechanosensitive channel of small conductance-like 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002563127586323417+
Transcript Sequence

Network for GWHGAAEX008952

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.120
SRR2545915Juvenile tuber19.940
SRP108465SRR5643513five period of Gastrodia elata4.320
SRR5643514five period of Gastrodia elata5.310
SRR5643515five period of Gastrodia elata3.600
SRR5643524five period of Gastrodia elata4.780
SRR5643525five period of Gastrodia elata9.110
SRR5643528five period of Gastrodia elata10.600
SRR5643658five period of Gastrodia elata12.470
SRR5643659five period of Gastrodia elata5.170
SRR5643660five period of Gastrodia elata7.450
SRR5643661five period of Gastrodia elata5.660
SRR5643662five period of Gastrodia elata5.670
SRR5643663five period of Gastrodia elata7.580
SRR5643664five period of Gastrodia elata6.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.940
SRR6049655Rhizomagastrodiae_C368-T10_good_11.230
SRR6049656Rhizomagastrodiae_C368-T07_good_16.530
SRR6049657Rhizomagastrodiae_C368-T07_good_18.370
SRR6049658Rhizomagastrodiae_C368-T04_good_115.620
SRR6049659Rhizomagastrodiae_C368-T04_good_115.320
SRR6049660Rhizomagastrodiae_C368-T01_good_110.590
SRR6049661Rhizomagastrodiae_C368-T04_good_111.400
SRR6049662Rhizomagastrodiae_C368-T01_good_15.550
SRR6049663Rhizomagastrodiae_C368-T01_good_16.600
SRR6049664Rhizomagastrodiae_C368-T10_good_15.830
SRR6049665Rhizomagastrodiae_C368-T10_good_15.830
SRP279888GastroGastrodia elata tuber 7.01
JuvenJuvenile tuber5.91
Mother_GastroMother tuber of Gastrodia elata 8.53
Mother_JuvenMother tuber of Juvenile 4.40