Detail information of GWHGAAEX008956/evm.TU.scaffold_23.272
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15675997|ref|NP_273124.1| | 2.00E-89 | molecular chaperone DnaJ [Neisseria meningitidis MC58] |
| KOG | KOG0715 | 2.00E-151 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|672203192|ref|XP_008778581.1| | 0 | PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Phoenix dactylifera] |
| Swissprot | tr|Q38813|DNAJ1_ARATH | 9.00E-89 | Chaperone protein dnaJ 1, mitochondrial (Precursor) |
| trEMBL | tr|D7T2W9|D7T2W9_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI24850.3} |
| TAIR | AT5G48030 | 2.00E-151 | gametophytic factor 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000025 | 6361176 | 6386339 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008956
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 89 | 151 | 2.70E-26 |
| PF01556.17 | DnaJ_C | 208 | 421 | 5.00E-39 |
| PF00684.18 | DnaJ_CXXCXGXG | 235 | 295 | 9.10E-11 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0009408 | Biological Process | response to heat |
| GO:0051082 | Molecular Function | unfolded protein binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0031072 | Molecular Function | heat shock protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 297.900 |
| SRR2545915 | Juvenile tuber | 296.560 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 135.070 |
| SRR5643514 | five period of Gastrodia elata | 101.060 | |
| SRR5643515 | five period of Gastrodia elata | 107.040 | |
| SRR5643524 | five period of Gastrodia elata | 94.360 | |
| SRR5643525 | five period of Gastrodia elata | 92.590 | |
| SRR5643528 | five period of Gastrodia elata | 67.810 | |
| SRR5643658 | five period of Gastrodia elata | 84.880 | |
| SRR5643659 | five period of Gastrodia elata | 187.160 | |
| SRR5643660 | five period of Gastrodia elata | 221.420 | |
| SRR5643661 | five period of Gastrodia elata | 216.390 | |
| SRR5643662 | five period of Gastrodia elata | 245.280 | |
| SRR5643663 | five period of Gastrodia elata | 206.820 | |
| SRR5643664 | five period of Gastrodia elata | 294.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 226.810 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 144.750 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 168.710 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 279.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 287.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 364.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 264.140 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 263.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 130.120 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 180.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 116.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 116.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 261.80 |
| Juven | Juvenile tuber | 185.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 77.58 | |
| Mother_Juven | Mother tuber of Juvenile | 138.51 |