Detail information of GWHGAAEX008957/evm.TU.scaffold_23.273


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42825.00E-40Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|590680697|ref|XP_007040932.1|2.73E-73Homeodomain-like superfamily protein [Theobroma cacao]
Swissprottr|O80450|TGT3B_ARATH2.00E-40Trihelix transcription factor GT-3b
trEMBLtr|A0A061G7N3|A0A061G7N3_THECC1.00E-73Homeodomain-like superfamily protein {ECO:0000313|EMBL:EOY25433.1}
TAIRAT2G382505.00E-40Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002563869136390372+
Transcript Sequence

Network for GWHGAAEX008957

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4301134.10E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.620
SRR2545915Juvenile tuber16.390
SRP108465SRR5643513five period of Gastrodia elata33.110
SRR5643514five period of Gastrodia elata24.830
SRR5643515five period of Gastrodia elata59.810
SRR5643524five period of Gastrodia elata33.650
SRR5643525five period of Gastrodia elata68.040
SRR5643528five period of Gastrodia elata47.380
SRR5643658five period of Gastrodia elata36.200
SRR5643659five period of Gastrodia elata63.590
SRR5643660five period of Gastrodia elata39.050
SRR5643661five period of Gastrodia elata59.490
SRR5643662five period of Gastrodia elata53.510
SRR5643663five period of Gastrodia elata42.620
SRR5643664five period of Gastrodia elata66.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.790
SRR6049655Rhizomagastrodiae_C368-T10_good_122.230
SRR6049656Rhizomagastrodiae_C368-T07_good_138.660
SRR6049657Rhizomagastrodiae_C368-T07_good_133.020
SRR6049658Rhizomagastrodiae_C368-T04_good_129.630
SRR6049659Rhizomagastrodiae_C368-T04_good_132.670
SRR6049660Rhizomagastrodiae_C368-T01_good_154.140
SRR6049661Rhizomagastrodiae_C368-T04_good_129.040
SRR6049662Rhizomagastrodiae_C368-T01_good_133.820
SRR6049663Rhizomagastrodiae_C368-T01_good_166.490
SRR6049664Rhizomagastrodiae_C368-T10_good_132.180
SRR6049665Rhizomagastrodiae_C368-T10_good_132.180
SRP279888GastroGastrodia elata tuber 23.53
JuvenJuvenile tuber20.64
Mother_GastroMother tuber of Gastrodia elata 86.31
Mother_JuvenMother tuber of Juvenile 68.85