Detail information of GWHGAAEX008960/evm.TU.scaffold_23.275


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG37944.00E-96CBF1-interacting corepressor CIR and related proteins
nrgi|672171211|ref|XP_008805669.1|1.49E-125PREDICTED: uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Phoenix dactylifera]
Swissprottr|Q8VZ67|Y4919_ARATH8.00E-98Uncharacterized zinc finger CCHC domain-containing protein At4g19190
trEMBLtr|A0A096RAD7|A0A096RAD7_MAIZE4.00E-114Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G084942_P03}
TAIRAT4G19190_14.00E-96Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002564134616424672-
Transcript Sequence

Network for GWHGAAEX008960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15288.5zf-CCHC_61681891.20E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06066CIR Notch signaling pathway map04330

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.210
SRR2545915Juvenile tuber20.100
SRP108465SRR5643513five period of Gastrodia elata13.070
SRR5643514five period of Gastrodia elata12.800
SRR5643515five period of Gastrodia elata15.220
SRR5643524five period of Gastrodia elata13.150
SRR5643525five period of Gastrodia elata18.530
SRR5643528five period of Gastrodia elata20.340
SRR5643658five period of Gastrodia elata18.140
SRR5643659five period of Gastrodia elata14.470
SRR5643660five period of Gastrodia elata16.980
SRR5643661five period of Gastrodia elata14.340
SRR5643662five period of Gastrodia elata18.600
SRR5643663five period of Gastrodia elata17.980
SRR5643664five period of Gastrodia elata20.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.920
SRR6049655Rhizomagastrodiae_C368-T10_good_113.780
SRR6049656Rhizomagastrodiae_C368-T07_good_114.390
SRR6049657Rhizomagastrodiae_C368-T07_good_116.480
SRR6049658Rhizomagastrodiae_C368-T04_good_114.150
SRR6049659Rhizomagastrodiae_C368-T04_good_116.520
SRR6049660Rhizomagastrodiae_C368-T01_good_115.380
SRR6049661Rhizomagastrodiae_C368-T04_good_112.590
SRR6049662Rhizomagastrodiae_C368-T01_good_111.170
SRR6049663Rhizomagastrodiae_C368-T01_good_111.050
SRR6049664Rhizomagastrodiae_C368-T10_good_113.340
SRR6049665Rhizomagastrodiae_C368-T10_good_113.340
SRP279888GastroGastrodia elata tuber 24.12
JuvenJuvenile tuber15.68
Mother_GastroMother tuber of Gastrodia elata 22.01
Mother_JuvenMother tuber of Juvenile 24.82