Detail information of GWHGAAEX008961/evm.TU.scaffold_23.276


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG37949.00E-31CBF1-interacting corepressor CIR and related proteins
nrgi|527191047|gb|EPS62043.1|6.83E-32hypothetical protein M569_12751, partial [Genlisea aurea]
Swissprottr|Q8VZ67|Y4919_ARATH5.00E-29Uncharacterized zinc finger CCHC domain-containing protein At4g19190
trEMBLtr|S8DGU9|S8DGU9_9LAMI3.00E-32Uncharacterized protein {ECO:0000313|EMBL:EPS62043.1} (Fragment)
TAIRAT4G19190_19.00E-31Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002564273556427699-
Transcript Sequence

Network for GWHGAAEX008961

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10197.8Cir_N781101.90E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06066CIR Notch signaling pathway map04330

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.540
SRR2545915Juvenile tuber21.010
SRP108465SRR5643513five period of Gastrodia elata15.970
SRR5643514five period of Gastrodia elata16.950
SRR5643515five period of Gastrodia elata31.600
SRR5643524five period of Gastrodia elata19.570
SRR5643525five period of Gastrodia elata37.360
SRR5643528five period of Gastrodia elata24.240
SRR5643658five period of Gastrodia elata30.980
SRR5643659five period of Gastrodia elata20.580
SRR5643660five period of Gastrodia elata19.290
SRR5643661five period of Gastrodia elata35.790
SRR5643662five period of Gastrodia elata27.730
SRR5643663five period of Gastrodia elata23.080
SRR5643664five period of Gastrodia elata23.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.400
SRR6049655Rhizomagastrodiae_C368-T10_good_144.590
SRR6049656Rhizomagastrodiae_C368-T07_good_127.930
SRR6049657Rhizomagastrodiae_C368-T07_good_125.150
SRR6049658Rhizomagastrodiae_C368-T04_good_137.320
SRR6049659Rhizomagastrodiae_C368-T04_good_137.030
SRR6049660Rhizomagastrodiae_C368-T01_good_124.480
SRR6049661Rhizomagastrodiae_C368-T04_good_127.140
SRR6049662Rhizomagastrodiae_C368-T01_good_124.270
SRR6049663Rhizomagastrodiae_C368-T01_good_129.030
SRR6049664Rhizomagastrodiae_C368-T10_good_121.710
SRR6049665Rhizomagastrodiae_C368-T10_good_121.710
SRP279888GastroGastrodia elata tuber 31.83
JuvenJuvenile tuber11.17
Mother_GastroMother tuber of Gastrodia elata 15.85
Mother_JuvenMother tuber of Juvenile 33.82