Detail information of GWHGAAEX008968/evm.TU.scaffold_23.283


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743832951|ref|XP_010935120.1|2.53E-123PREDICTED: uncharacterized protein LOC105055101 [Elaeis guineensis]
trEMBLtr|M0RZZ1|M0RZZ1_MUSAM8.00E-119Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P14830_001}
TAIRAT4G350409.00E-82Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002566524516677356-
Transcript Sequence

Network for GWHGAAEX008968

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07716.14bZIP_2881402.40E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.700
SRR2545915Juvenile tuber5.740
SRP108465SRR5643513five period of Gastrodia elata9.460
SRR5643514five period of Gastrodia elata11.080
SRR5643515five period of Gastrodia elata9.210
SRR5643524five period of Gastrodia elata10.540
SRR5643525five period of Gastrodia elata12.740
SRR5643528five period of Gastrodia elata10.810
SRR5643658five period of Gastrodia elata9.860
SRR5643659five period of Gastrodia elata11.420
SRR5643660five period of Gastrodia elata10.420
SRR5643661five period of Gastrodia elata9.970
SRR5643662five period of Gastrodia elata9.560
SRR5643663five period of Gastrodia elata8.010
SRR5643664five period of Gastrodia elata7.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.220
SRR6049655Rhizomagastrodiae_C368-T10_good_19.280
SRR6049656Rhizomagastrodiae_C368-T07_good_19.940
SRR6049657Rhizomagastrodiae_C368-T07_good_18.340
SRR6049658Rhizomagastrodiae_C368-T04_good_17.970
SRR6049659Rhizomagastrodiae_C368-T04_good_17.840
SRR6049660Rhizomagastrodiae_C368-T01_good_17.420
SRR6049661Rhizomagastrodiae_C368-T04_good_17.750
SRR6049662Rhizomagastrodiae_C368-T01_good_17.120
SRR6049663Rhizomagastrodiae_C368-T01_good_16.820
SRR6049664Rhizomagastrodiae_C368-T10_good_18.830
SRR6049665Rhizomagastrodiae_C368-T10_good_18.830
SRP279888GastroGastrodia elata tuber 8.19
JuvenJuvenile tuber9.77
Mother_GastroMother tuber of Gastrodia elata 7.56
Mother_JuvenMother tuber of Juvenile 6.27