Detail information of GWHGAAEX008971/evm.TU.scaffold_23.286


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383452680|ref|YP_005366669.1|3.00E-63peptidyl-prolyl cis-trans isomerase [Corallococcus coralloides DSM 2259]
KOGKOG08651.00E-105Cyclophilin type peptidyl-prolyl cis-trans isomerase
nrgi|743855233|ref|XP_010941301.1|3.50E-120PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 isoform X1 [Elaeis guineensis]
Swissprottr|O49605|CP21A_ARATH4.00E-106Peptidyl-prolyl cis-trans isomerase CYP21-1 (Precursor)
trEMBLtr|V4U9B7|V4U9B7_9ROSI3.00E-109Uncharacterized protein {ECO:0000313|EMBL:ESR35869.1}
TAIRAT4G349601.00E-105Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002567012506736220-
Transcript Sequence

Network for GWHGAAEX008971

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase1292896.50E-42
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0006457Biological Processprotein folding
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.120
SRR2545915Juvenile tuber39.780
SRP108465SRR5643513five period of Gastrodia elata30.060
SRR5643514five period of Gastrodia elata30.020
SRR5643515five period of Gastrodia elata28.660
SRR5643524five period of Gastrodia elata29.330
SRR5643525five period of Gastrodia elata49.070
SRR5643528five period of Gastrodia elata31.890
SRR5643658five period of Gastrodia elata41.690
SRR5643659five period of Gastrodia elata28.440
SRR5643660five period of Gastrodia elata27.930
SRR5643661five period of Gastrodia elata27.050
SRR5643662five period of Gastrodia elata24.820
SRR5643663five period of Gastrodia elata26.170
SRR5643664five period of Gastrodia elata24.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.720
SRR6049655Rhizomagastrodiae_C368-T10_good_124.020
SRR6049656Rhizomagastrodiae_C368-T07_good_123.130
SRR6049657Rhizomagastrodiae_C368-T07_good_126.670
SRR6049658Rhizomagastrodiae_C368-T04_good_119.290
SRR6049659Rhizomagastrodiae_C368-T04_good_115.580
SRR6049660Rhizomagastrodiae_C368-T01_good_121.600
SRR6049661Rhizomagastrodiae_C368-T04_good_120.360
SRR6049662Rhizomagastrodiae_C368-T01_good_125.780
SRR6049663Rhizomagastrodiae_C368-T01_good_120.870
SRR6049664Rhizomagastrodiae_C368-T10_good_127.120
SRR6049665Rhizomagastrodiae_C368-T10_good_127.120
SRP279888GastroGastrodia elata tuber 20.06
JuvenJuvenile tuber40.92
Mother_GastroMother tuber of Gastrodia elata 11.39
Mother_JuvenMother tuber of Juvenile 26.02