Detail information of GWHGAAEX008997/evm.TU.scaffold_230.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313680089|ref|YP_004057828.1|1.00E-147hypothetical protein [Oceanithermus profundus DSM 14977]
KOGKOG21180Predicted membrane protein, contains two CBS domains
nrgi|672115683|ref|XP_008780985.1|0PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Phoenix dactylifera]
Swissprottr|Q84R21|Y1559_ARATH0DUF21 domain-containing protein At1g55930, chloroplastic (Precursor)
trEMBLtr|J3LQK0|J3LQK0_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB03G33260.1}
TAIRAT1G55930_20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002276169295787+
Transcript Sequence

Network for GWHGAAEX008997

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01595.19DUF211703475.00E-42
PF00571.27CBS3624190.0034
PF00571.27CBS4324851.20E-05
PF03471.16CorC_HlyC5076113.20E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0050660Molecular Functionflavin adenine dinucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.780
SRR2545915Juvenile tuber27.040
SRP108465SRR5643513five period of Gastrodia elata13.310
SRR5643514five period of Gastrodia elata14.060
SRR5643515five period of Gastrodia elata14.250
SRR5643524five period of Gastrodia elata13.480
SRR5643525five period of Gastrodia elata21.680
SRR5643528five period of Gastrodia elata19.330
SRR5643658five period of Gastrodia elata18.760
SRR5643659five period of Gastrodia elata26.340
SRR5643660five period of Gastrodia elata36.260
SRR5643661five period of Gastrodia elata31.170
SRR5643662five period of Gastrodia elata30.340
SRR5643663five period of Gastrodia elata33.130
SRR5643664five period of Gastrodia elata38.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.330
SRR6049655Rhizomagastrodiae_C368-T10_good_112.750
SRR6049656Rhizomagastrodiae_C368-T07_good_113.310
SRR6049657Rhizomagastrodiae_C368-T07_good_114.480
SRR6049658Rhizomagastrodiae_C368-T04_good_119.180
SRR6049659Rhizomagastrodiae_C368-T04_good_116.840
SRR6049660Rhizomagastrodiae_C368-T01_good_114.220
SRR6049661Rhizomagastrodiae_C368-T04_good_118.540
SRR6049662Rhizomagastrodiae_C368-T01_good_114.790
SRR6049663Rhizomagastrodiae_C368-T01_good_113.920
SRR6049664Rhizomagastrodiae_C368-T10_good_112.060
SRR6049665Rhizomagastrodiae_C368-T10_good_112.060
SRP279888GastroGastrodia elata tuber 50.11
JuvenJuvenile tuber21.98
Mother_GastroMother tuber of Gastrodia elata 23.12
Mother_JuvenMother tuber of Juvenile 25.32