Detail information of GWHGAAEX009002/evm.TU.scaffold_230.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|56697985|ref|YP_168356.1|2.00E-14monooxygenase, putative [Ruegeria pomeroyi DSS-3]
KOGKOG05374.00E-45Cytochrome b5
nrgi|743760606|ref|XP_010937875.1|8.68E-55PREDICTED: cytochrome b5 isoform A [Elaeis guineensis]
Swissprottr|Q9FDW8|CYB5A_ARATH1.00E-45Cytochrome b5 isoform A {ECO:0000303|PubMed:19054355}
trEMBLtr|Q84KI3|Q84KI3_SORBI9.00E-51Putative uncharacterized protein Sb01g007770 {ECO:0000313|EMBL:EER93435.1}
TAIRAT1G263404.00E-45cytochrome B5 isoform A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000227140778150876+
Transcript Sequence

Network for GWHGAAEX009002

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.27Cyt-b511803.70E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.850
SRR2545915Juvenile tuber23.620
SRP108465SRR5643513five period of Gastrodia elata14.520
SRR5643514five period of Gastrodia elata16.230
SRR5643515five period of Gastrodia elata13.240
SRR5643524five period of Gastrodia elata17.190
SRR5643525five period of Gastrodia elata48.120
SRR5643528five period of Gastrodia elata35.400
SRR5643658five period of Gastrodia elata28.030
SRR5643659five period of Gastrodia elata18.440
SRR5643660five period of Gastrodia elata15.270
SRR5643661five period of Gastrodia elata16.540
SRR5643662five period of Gastrodia elata21.190
SRR5643663five period of Gastrodia elata14.760
SRR5643664five period of Gastrodia elata13.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.150
SRR6049655Rhizomagastrodiae_C368-T10_good_119.630
SRR6049656Rhizomagastrodiae_C368-T07_good_114.260
SRR6049657Rhizomagastrodiae_C368-T07_good_111.380
SRR6049658Rhizomagastrodiae_C368-T04_good_113.970
SRR6049659Rhizomagastrodiae_C368-T04_good_15.590
SRR6049660Rhizomagastrodiae_C368-T01_good_114.440
SRR6049661Rhizomagastrodiae_C368-T04_good_114.330
SRR6049662Rhizomagastrodiae_C368-T01_good_116.090
SRR6049663Rhizomagastrodiae_C368-T01_good_110.380
SRR6049664Rhizomagastrodiae_C368-T10_good_116.590
SRR6049665Rhizomagastrodiae_C368-T10_good_116.590
SRP279888GastroGastrodia elata tuber 17.52
JuvenJuvenile tuber35.60
Mother_GastroMother tuber of Gastrodia elata 49.94
Mother_JuvenMother tuber of Juvenile 23.21