Detail information of GWHGAAEX009013/evm.TU.scaffold_230.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30658.00E-97SNAP-25 (synaptosome-associated protein) component of SNARE complex
nrgi|672199997|ref|XP_008777761.1|3.26E-123PREDICTED: SNAP25 homologous protein SNAP33-like [Phoenix dactylifera]
Swissprottr|Q9S7P9|SNP33_ARATH2.00E-97SNAP25 homologous protein SNAP33
trEMBLtr|F5C0G9|F5C0G9_SOLCH4.00E-105SNAP33 {ECO:0000313|EMBL:AEB71568.1}
TAIRAT5G612108.00E-97soluble N-ethylmaleimide-sensitive factor adaptor protein 33

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000227492752497543+
Transcript Sequence

Network for GWHGAAEX009013

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18211SNAP25 Insulin secretion map04911
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms134.230
SRR2545915Juvenile tuber163.680
SRP108465SRR5643513five period of Gastrodia elata103.910
SRR5643514five period of Gastrodia elata93.920
SRR5643515five period of Gastrodia elata141.320
SRR5643524five period of Gastrodia elata103.280
SRR5643525five period of Gastrodia elata148.420
SRR5643528five period of Gastrodia elata188.280
SRR5643658five period of Gastrodia elata97.170
SRR5643659five period of Gastrodia elata141.040
SRR5643660five period of Gastrodia elata115.170
SRR5643661five period of Gastrodia elata143.020
SRR5643662five period of Gastrodia elata233.310
SRR5643663five period of Gastrodia elata158.650
SRR5643664five period of Gastrodia elata402.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1171.820
SRR6049655Rhizomagastrodiae_C368-T10_good_1174.650
SRR6049656Rhizomagastrodiae_C368-T07_good_1136.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1153.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1155.430
SRR6049659Rhizomagastrodiae_C368-T04_good_1186.500
SRR6049660Rhizomagastrodiae_C368-T01_good_1189.300
SRR6049661Rhizomagastrodiae_C368-T04_good_1141.330
SRR6049662Rhizomagastrodiae_C368-T01_good_1110.190
SRR6049663Rhizomagastrodiae_C368-T01_good_1159.720
SRR6049664Rhizomagastrodiae_C368-T10_good_1146.280
SRR6049665Rhizomagastrodiae_C368-T10_good_1146.280
SRP279888GastroGastrodia elata tuber 161.89
JuvenJuvenile tuber159.98
Mother_GastroMother tuber of Gastrodia elata 376.91
Mother_JuvenMother tuber of Juvenile 660.49