Detail information of GWHGAAEX009017/evm.TU.scaffold_230.25
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|297569221|ref|YP_003690565.1| | 4.00E-131 | pyruvate kinase [Desulfurivibrio alkaliphilus AHT2] |
| KOG | KOG2323 | 0 | Pyruvate kinase |
| nr | gi|743791692|ref|XP_010923501.1| | 0 | PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Elaeis guineensis] |
| Swissprot | tr|Q43117|KPYA_RICCO | 0 | Pyruvate kinase isozyme A, chloroplastic (Precursor) |
| trEMBL | tr|W9S8F2|W9S8F2_9ROSA | 0 | Pyruvate kinase {ECO:0000256|RuleBase:RU000504} |
| TAIR | AT3G22960 | 0 | Pyruvate kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000227 | 506965 | 539948 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009017
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00224.20 | PK | 92 | 436 | 2.70E-93 |
| PF02887.15 | PK_C | 461 | 560 | 1.00E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006096 | Biological Process | glycolytic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004743 | Molecular Function | pyruvate kinase activity |
| GO:0030955 | Molecular Function | potassium ion binding |
| GO:0000287 | Molecular Function | magnesium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 123.900 |
| SRR2545915 | Juvenile tuber | 127.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 59.420 |
| SRR5643514 | five period of Gastrodia elata | 55.920 | |
| SRR5643515 | five period of Gastrodia elata | 55.690 | |
| SRR5643524 | five period of Gastrodia elata | 53.350 | |
| SRR5643525 | five period of Gastrodia elata | 48.300 | |
| SRR5643528 | five period of Gastrodia elata | 50.680 | |
| SRR5643658 | five period of Gastrodia elata | 45.580 | |
| SRR5643659 | five period of Gastrodia elata | 98.830 | |
| SRR5643660 | five period of Gastrodia elata | 104.820 | |
| SRR5643661 | five period of Gastrodia elata | 92.220 | |
| SRR5643662 | five period of Gastrodia elata | 102.070 | |
| SRR5643663 | five period of Gastrodia elata | 100.920 | |
| SRR5643664 | five period of Gastrodia elata | 106.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 119.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 88.750 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 118.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 136.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 113.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 131.030 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 122.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 122.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 100.550 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 106.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 103.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 103.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 87.01 |
| Juven | Juvenile tuber | 86.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 34.02 | |
| Mother_Juven | Mother tuber of Juvenile | 62.31 |