Detail information of GWHGAAEX009020/evm.TU.scaffold_230.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|433609342|ref|YP_007041711.1|4.00E-55Mannose-6-phosphate isomerase [Saccharothrix espanaensis DSM 44229]
KOGKOG27576.00E-156Mannose-6-phosphate isomerase
nrgi|743800604|ref|XP_010926023.1|0PREDICTED: mannose-6-phosphate isomerase 2-like [Elaeis guineensis]
Swissprottr|Q9FZH5|MPI2_ARATH2.00E-156Mannose-6-phosphate isomerase 2
trEMBLtr|M0RRU8|M0RRU8_MUSAM7.00E-180Mannose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000611}
TAIRAT1G670706.00E-156Mannose-6-phosphate isomerase, type I

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000227626773635059+
Transcript Sequence

Network for GWHGAAEX009020

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01238.20PMI_typeI73773.80E-103
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01809manA, MPI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Fructose and mannose metabolismmap00051
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0009298Biological ProcessGDP-mannose biosynthetic process
GO:0005975Biological Processcarbohydrate metabolic process
GO:0008270Molecular Functionzinc ion binding
GO:0004476Molecular Functionmannose-6-phosphate isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.380
SRR2545915Juvenile tuber10.870
SRP108465SRR5643513five period of Gastrodia elata9.860
SRR5643514five period of Gastrodia elata13.170
SRR5643515five period of Gastrodia elata11.560
SRR5643524five period of Gastrodia elata14.330
SRR5643525five period of Gastrodia elata25.350
SRR5643528five period of Gastrodia elata16.800
SRR5643658five period of Gastrodia elata20.340
SRR5643659five period of Gastrodia elata6.570
SRR5643660five period of Gastrodia elata6.300
SRR5643661five period of Gastrodia elata4.620
SRR5643662five period of Gastrodia elata5.300
SRR5643663five period of Gastrodia elata5.420
SRR5643664five period of Gastrodia elata4.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.190
SRR6049655Rhizomagastrodiae_C368-T10_good_110.110
SRR6049656Rhizomagastrodiae_C368-T07_good_111.160
SRR6049657Rhizomagastrodiae_C368-T07_good_111.390
SRR6049658Rhizomagastrodiae_C368-T04_good_17.030
SRR6049659Rhizomagastrodiae_C368-T04_good_17.550
SRR6049660Rhizomagastrodiae_C368-T01_good_110.020
SRR6049661Rhizomagastrodiae_C368-T04_good_110.940
SRR6049662Rhizomagastrodiae_C368-T01_good_110.210
SRR6049663Rhizomagastrodiae_C368-T01_good_16.570
SRR6049664Rhizomagastrodiae_C368-T10_good_18.230
SRR6049665Rhizomagastrodiae_C368-T10_good_18.230
SRP279888GastroGastrodia elata tuber 7.18
JuvenJuvenile tuber6.64
Mother_GastroMother tuber of Gastrodia elata 5.87
Mother_JuvenMother tuber of Juvenile 5.59