Detail information of GWHGAAEX009030/evm.TU.scaffold_230.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743785894|ref|XP_010922033.1|0PREDICTED: uncharacterized protein LOC105045454 [Elaeis guineensis]
trEMBLtr|M5WUN3|M5WUN3_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ13038.1}
TAIRAT2G267700plectin-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000227813441900947-
Transcript Sequence

Network for GWHGAAEX009030

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16711.4SCAB-ABD55972.00E-20
PF16712.4SCAB_CC1022718.50E-62
PF16709.4SCAB-IgPH2854914.80E-99
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003779Molecular Functionactin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.280
SRR2545915Juvenile tuber15.370
SRP108465SRR5643513five period of Gastrodia elata12.870
SRR5643514five period of Gastrodia elata12.350
SRR5643515five period of Gastrodia elata17.040
SRR5643524five period of Gastrodia elata13.970
SRR5643525five period of Gastrodia elata32.280
SRR5643528five period of Gastrodia elata32.680
SRR5643658five period of Gastrodia elata34.120
SRR5643659five period of Gastrodia elata16.850
SRR5643660five period of Gastrodia elata11.760
SRR5643661five period of Gastrodia elata17.940
SRR5643662five period of Gastrodia elata15.270
SRR5643663five period of Gastrodia elata12.790
SRR5643664five period of Gastrodia elata13.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.320
SRR6049655Rhizomagastrodiae_C368-T10_good_15.630
SRR6049656Rhizomagastrodiae_C368-T07_good_111.160
SRR6049657Rhizomagastrodiae_C368-T07_good_117.660
SRR6049658Rhizomagastrodiae_C368-T04_good_110.910
SRR6049659Rhizomagastrodiae_C368-T04_good_111.310
SRR6049660Rhizomagastrodiae_C368-T01_good_113.220
SRR6049661Rhizomagastrodiae_C368-T04_good_114.380
SRR6049662Rhizomagastrodiae_C368-T01_good_17.510
SRR6049663Rhizomagastrodiae_C368-T01_good_16.800
SRR6049664Rhizomagastrodiae_C368-T10_good_16.670
SRR6049665Rhizomagastrodiae_C368-T10_good_16.670
SRP279888GastroGastrodia elata tuber 14.14
JuvenJuvenile tuber11.35
Mother_GastroMother tuber of Gastrodia elata 31.94
Mother_JuvenMother tuber of Juvenile 34.22