Detail information of GWHGAAEX009031/evm.TU.scaffold_230.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743785894|ref|XP_010922033.1|3.32E-156PREDICTED: uncharacterized protein LOC105045454 [Elaeis guineensis]
trEMBLtr|W1NU44|W1NU44_AMBTC6.00E-147Uncharacterized protein {ECO:0000313|EMBL:ERM99102.1}
TAIRAT2G267704.00E-135plectin-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000227922991932432+
Transcript Sequence

Network for GWHGAAEX009031

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16711.4SCAB-ABD1301693.60E-08
PF16712.4SCAB_CC1783462.70E-43
PF16709.4SCAB-IgPH3605583.30E-78
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003779Molecular Functionactin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.830
SRR2545915Juvenile tuber1.230
SRP108465SRR5643513five period of Gastrodia elata0.380
SRR5643514five period of Gastrodia elata0.310
SRR5643515five period of Gastrodia elata0.820
SRR5643524five period of Gastrodia elata0.690
SRR5643525five period of Gastrodia elata1.210
SRR5643528five period of Gastrodia elata0.930
SRR5643658five period of Gastrodia elata1.330
SRR5643659five period of Gastrodia elata1.130
SRR5643660five period of Gastrodia elata1.120
SRR5643661five period of Gastrodia elata1.520
SRR5643662five period of Gastrodia elata0.860
SRR5643663five period of Gastrodia elata1.110
SRR5643664five period of Gastrodia elata0.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.780
SRR6049655Rhizomagastrodiae_C368-T10_good_11.480
SRR6049656Rhizomagastrodiae_C368-T07_good_11.470
SRR6049657Rhizomagastrodiae_C368-T07_good_12.750
SRR6049658Rhizomagastrodiae_C368-T04_good_12.920
SRR6049659Rhizomagastrodiae_C368-T04_good_13.940
SRR6049660Rhizomagastrodiae_C368-T01_good_12.030
SRR6049661Rhizomagastrodiae_C368-T04_good_12.120
SRR6049662Rhizomagastrodiae_C368-T01_good_11.200
SRR6049663Rhizomagastrodiae_C368-T01_good_11.540
SRR6049664Rhizomagastrodiae_C368-T10_good_10.870
SRR6049665Rhizomagastrodiae_C368-T10_good_10.870
SRP279888GastroGastrodia elata tuber 4.82
JuvenJuvenile tuber2.74
Mother_GastroMother tuber of Gastrodia elata 1.89
Mother_JuvenMother tuber of Juvenile 3.75