Detail information of GWHGAAEX009037/evm.TU.scaffold_231.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743766910|ref|XP_010913700.1|1.20E-159PREDICTED: HAUS augmin-like complex subunit 1 [Elaeis guineensis]
trEMBLtr|M0SL32|M0SL32_MUSAM3.00E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P04650_001}
TAIRAT2G413504.00E-92Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000229318034331544+
Transcript Sequence

Network for GWHGAAEX009037

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0051225Biological Processspindle assembly
GO:0070652Cellular ComponentHAUS complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.620
SRR2545915Juvenile tuber24.440
SRP108465SRR5643513five period of Gastrodia elata22.630
SRR5643514five period of Gastrodia elata21.280
SRR5643515five period of Gastrodia elata21.540
SRR5643524five period of Gastrodia elata21.750
SRR5643525five period of Gastrodia elata16.010
SRR5643528five period of Gastrodia elata16.280
SRR5643658five period of Gastrodia elata17.220
SRR5643659five period of Gastrodia elata22.460
SRR5643660five period of Gastrodia elata22.450
SRR5643661five period of Gastrodia elata21.310
SRR5643662five period of Gastrodia elata18.390
SRR5643663five period of Gastrodia elata20.830
SRR5643664five period of Gastrodia elata19.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.000
SRR6049655Rhizomagastrodiae_C368-T10_good_141.350
SRR6049656Rhizomagastrodiae_C368-T07_good_127.810
SRR6049657Rhizomagastrodiae_C368-T07_good_131.900
SRR6049658Rhizomagastrodiae_C368-T04_good_128.130
SRR6049659Rhizomagastrodiae_C368-T04_good_132.390
SRR6049660Rhizomagastrodiae_C368-T01_good_126.850
SRR6049661Rhizomagastrodiae_C368-T04_good_124.320
SRR6049662Rhizomagastrodiae_C368-T01_good_128.130
SRR6049663Rhizomagastrodiae_C368-T01_good_127.200
SRR6049664Rhizomagastrodiae_C368-T10_good_132.740
SRR6049665Rhizomagastrodiae_C368-T10_good_132.740
SRP279888GastroGastrodia elata tuber 17.18
JuvenJuvenile tuber19.64
Mother_GastroMother tuber of Gastrodia elata 24.99
Mother_JuvenMother tuber of Juvenile 26.56