Gene detail

Detail information of GWHGAAEX009045/evm.TU.scaffold_232.3

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743790425\|ref\|XP_010923162.1\|	8.58E-100	PREDICTED: nuclear receptor coactivator 6-like isoform X2 [Elaeis guineensis]
trEMBL	tr\|M0T2K4\|M0T2K4_MUSAM	3.00E-75	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P28800_001}
trEMBL	tr\|M0T2K4\|M0T2K4_MUSAM	6.00E-50	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P28800_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000240	19074	60023	+

Transcript Sequence
>GWHTAAEX009045 ATGGAGGAACTAATTTTGGACGCACTTCCGGTGATCCTTTCATTGCAACTAGCTATGACTATGATGCCCCAATTGATGAATTTGCCTAGTGCTGCACCGGATGTAAGGGGCTATAAGGACAAGAGAAGAAATCGAAATAAATTTAACGGCAACATAAAATTACAAGATGATTTCATTTTTACAAACAAAGATGATTCAAGCGCCAGCCGTGCTAGCCTCACCTCTTCCACCTCTCCAAGTCAAGCGCCAGCCTGCTCCTCTCTACCAAGCCGAGCTCCTCAACCCTCGCCGAGCTTGCACCTCTTCTCCACTTGCCGAGCCCCTTCCCGTCGGTTGATCAGACGAGAGTTCCGTTCGAGCCCCTCAGCCCATCACATTCTCCATTTGGCGTTCGGCCGCAAGGATTCGCCGGCCTTTTTCCTTCATTCCACTCGATCCTCCATTCGGCGCAAGCAGCCTCTAGCTTCCGCTGATGCTTTTGGTAAGGAAATGACATCTGGTGGGACCATCGGTACGCGTGGCACTCCTTTATTCGACGAAGAGGCAGAGGTGGACCCCACGACTCTTGACCGATGGCGACTGCTGACGACGCGACTAACAGATGAAGTCTTGCGGGACCCACCTTCCACGCTTTGCCGCACGCTAATCTTTCCCAATGAAGCTTTTCAGTCACAATGCACTCATCTTTATTGCAAGCCCTGTTTGGCCTATATTGTTGCTACTACCCATGCTTGCCCTTATGATGGCTACCTGGTCACTGAAGCAGATTCTAAGCCTCTCTTAGAATTGAACAAATCACTTGCTGAAACGATCGGCAAAGTACAAGTTTATTGTCTTTATCATAGGAGTGGATGCCAATGGCAAGGGACTTTGTCTGATTGCATTAATCATTGCATTGGGTGTAATTTTGGAAATTCTCCTGTTGTTTGCAATAGATGTGGCACTCAAATTGTACATCGTCAAGTTCAAGAGCATGCACAGACATGCCCTGGATTACAGCCTCAAGGGCAACAAATAGATAATGTCCAGGTTACTGTCTCTCCGGCATCAAACCAAGATACCACGCAGAATTCCTCTGCTGCTTTGCCAGCTGCCACACCATCTTCAACAGCTGCTGCAACAACAGTCATGTCCACTTCAACTGCTACTGCAGCATCATCAATTTCTGCGCCTATTAGTGTCCCTGCTGCTGCTTCTGCTCCCAATTCTGCTGTTCAGGTTCAAAACCAAGCTGCTACAGTTGCTTATCCACAAATTGGTGTGCAAGCTCCTACAGTTGAACAGTGGTACCGGCAACAGCAACTTCAATATCAACAGTATTATCAGCAATATCCTGGATATGATCCTTACCAGCAGCAATACCAACAATATGGTCAATATCCACAGCAAACTTATCAACAGTACCCACAAACTCATATGCAGGTTGCTCCACAGCAGGTAATTCAGGGTCAACAGCTAGCGCAGCAGCAGGCTCAACCATATGTGCAGCCCCAACCTCAAGTTCAGTCCCATACTCCTGTACAAGCACAACCTCAGGTTCATAGCACCCATCTTCAAACGCAACAGCAACAACTTGTTCCCCAGCCCCAGCCCCAGCCCCAGCCCCAACCCCAGCTCCAGCTCCAGCCCCAGCTGAATCCGCATCCTCAGCCCCAGCCTCAGCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGTCAATGTCCCAACCCCAGCTCCAGCCCCAGCCCCAGCCCCATTCCTACCTCCAGCCACAGCCACAGCTCTCTGCCCCACCCCAGCCCCAACCACAGCCATATCCCTATTCCCATCCTCATCCCCAACCCCATCCACAGTCCCAGTTGCATAGTCACTCACAGCCACAGCTTCAAACCCAACTCCCACATTCTCAACTTCCTCAAGCACAGCATGTTTCTGTTCAGCATTCTCACCAACAAGTACAACCACAAGTTACACCGCAGGTCACTCAGATACCAACGCATCCAGGGCAACCCCAATATATACAAATGCAGCCCTATGTCCAAGCTCAACAGCCAGCACATCATTCCCAGCAGCATCAACCATCTGTCCTTCCACAACAGCAGCTACCACAACCACCTGCACAACATCCACAGCACCACACTCAAAGTCAGCCACGCGCATTACCATTGTCCCAAGCACCATACAATCAATCCCAGCCTCAATTTCAACAACCTCATACACAACAGCCCCGTCCTCTTCCTCAGGGCCAACCACAACCCTTGGCGCATCCTCAACCCCAGCCCCAGCCTCAATCTCAGAATCCATCTGCTCATGCGGTAACAGGCCATCAATCTTATCCGCAGTTACAGTCGCATCAGCAAATGCCTCATGGCATGCTACAACAGCGCCCTATGAATCTCCAACAGCCTGGTGTTTCTCAACAGGCTTCTCAAAATCAGTTCCCCATCCATCAAGCTCCACAATTAAGACCCCCACAAACTTATATGCCTCCACAAACACAGCAGCACTCTGCTACACATCCTCAAGCACAAATTTCTTTTCCAAATGCTGCCTCACAGCCACTACCTCCACACTTAGCCCATCAGCCTGGTCAGCAAACGCATCATTCAGCAGGCATGCAAATGCAAACACAACAGCTGGCATTACCTCAACAGCAAGCACTTAGCCAAATTCCATCTGCACAGCATCAGGGAGGATTACTGCCACCTTCACATTCTCCACAGTCTTTAAGGCCACAGGCTCAGTCATACATACAGTCCAATGGTCCTGTTCAAGGCAGGTCTATGGCATCAAATCAATCACAGTCACAGAAAGTTCAACATTCTCCTACTAAGCTTATTCAATCTAGTATGAATCAACACTCTCCCAATCATAATCATGCTGTCAGACAACTTGGATCCATCCATCATGAGAGCCAGGACTCTGTGGTTCCCGCACCTTCTCGTTCAGGAACAGAAACTACTCAAGTGTCAGTGTCTGGATCAGACCATAAGTCAACTGCACTTGAAAGGCCGGTTGATTCTGTTTTAGACAAGGCGAACCAAGGAAAACCCTTAGAGGCAGATGCAGCTACTGGAAATGCTGTTGGATCTGAAACATCTAGGTCTTCTGATCCTGTTAATTCTAAGCCTGAGGATGATTCCAAAACTTTGGTTGATGGGGAGACACGCAGTGATGTCAATGAAACCACTGAAACTAAAGAGAGCAAAGATGGTTTTGTTTCAAAGCATTTAAAAGGGGTAGCTGCAGATTTTCAGGATGGAATAGGACTAAAGGAAGCTCAAGGGGCTGAAGGAAAGAAAAATGCTATTGCTAATTCTTTGGCTGAAGGAATTGCAGTTGATTCTGTATTTGACGGGCCTAATGCAGTTCAACCGTTGTCAGGAAACATTAATCAATTTGAGAAAATAGATCAAGTTTATAGTTCTAGAAGCAAAACCACTGGAAATGTGGCTAATATGGCTCATGCTTCTCAGTCTATGCCTGCAGGACAACAGAAACTTGTGGAAGTTCATGATAAGGCATTAGCTGCTTCTGGGTATCATGATAAAGGTCTATCCCAATTTCTCCCACCTCAACTAGGAGCAGTAGGCCTCCATGGAATATCTCCTGTAGGTGCACTTGATCATGAGAGATGCTCTCAGAATATTCCACATGGCCACTCTACCAATATAGATGCACCGATAGCATCTCAAAGACCTTCTGGAGCTGATGGAATATTCCCACAGAACATGTCCCTACCTACATCTAGTCAAGCAAGAAAATTTCAGGAACCATTTCAGCAAGCTATGTTGGGGCATGGTCCATCAGCAACACCTGGACAGGTATGGCCACCCGGGTATTCAGAAAATATTCATTATCCGATCCAGACTGCTGCTATGGCAGAGCCTTTTCAGCCTCCAGCTGCAAAACAACCTTACATATCAAATATTTTACCAAAAAATGCAGAGGAAATTGTTCCATTTCCCATACGGAATCTAAGCCATGGGCCTTTACTCAATGCTATTGGCCCTACAGCTGCACAGATTGATCCTTTGGCTCGATCATTTATGCCTGGGCCGCCACCTGGAGCATTTGATGCACCAAGCGGGATGATGGCTAGGAGTTCTCACTTTGGCTATGAGGATCGAGCTGGTAGATCCGGATCAGTTAACTTGATAGAAGGGCCTGGGTACTTTGATGGAAAGCAGTCTGAGTCTCATAGACCCTTACTGGGGGAATATTCTTCTTTTGGACAGCAGACTGTGATGCTGCCAAACATGAAAATGAATGGTTTGTCTGGTAAAGGCCCTACAGGTATTATGCATGATTTATCATTTTCACATGGCATGCCAGATGAAAGATTTCAACCACCATCTGGAGAAAGGTTTAAACCATTGCTTGAAGAGAGTTTGAGAAATGCTCCAGCTGAAATTTTTAGACCTGTGTTGGAGTCTGGTTGGAACATCAGTAATCGCAGGGAATTTGAAGAAGATTTAAAACAATTCCCTAGATCTAGTCATTTGGATAGTGATAGTGCACATAAATTTAATGCATATGCACCTGCTAGTAGGCCAATAGAAAGGGGACAACATTTTGGACCTGATGGTGGATCAAGGCCATTTGATAGATCTTTAATTGGTTCCTTTCCCCGACCACACCCTCCAAGTGGTCGATTTCCACCTATTAGTGGTGGTTTAGAATTTGGACCATTGGAGATTTCAGGCAAACAAAGGGTTCCTCCATTCCATGATGATTTGAGTGGGAAGAATGATGTGCATCCTGATCGTCTCAGGCCTTTTTCTGAATTTGGCCGCTCTCATATTGATAATCTTACTTCTTTAAAAAGTCCAGGTGCTCGTGATAGCTCAGGGCATTTTAGAAAGGAATTAGATGCTTTTGATGCTACCCACAGTCGCGTGCGTGCTTCTGAACATGTGACCCATGGTTTTGCAAATCATATTAAAGTTGGGGAACCTTTTGGAACTCGCAATTTTCCTAGTCATCTTATGTTTAATGATTCTACTCATGGTCCACTTCGTGGCAGCGAGTCAATTGGGTTTGGTGGATTTGGTCGAATTCCAGTTGATGATTCAGGGTTTTCTAATAGTTTTCCTGTTCATGATTCGGTTTCCCTTCACGGTGATGTTAATTCTTTCGAAAATTTGAGGAAGAAGCACGGAAGTATGGGATGGTGCCGCTTATGCAAGATAGACTGCGAAACAGTAGAGGGTTTGGAGGTGCATTCTCAGACAAAGGATCATCAGAATATGGCTATGGAGATAGTTCTTAACATTAAGAAGGAGAATGCAAAGAAGCAAAAATTGTCACTTTTTAAGCTTGGTGAAGTTGTAGAATTTGAAGTACCTGCTACAAGTTGGTTTTGGCTTGTTTTGAAGTATAGAAGAGGTAAATGTTTGATGAAGGAAAAGCATGGGTCTGATGCTCTGCCGAGATAA

Network for GWHGAAEX009045

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX009045
MEELILDALPVILSLQLAMTMMPQLMNLPSAAPDVRGYKDKRRNRNKFNGNIKLQDDFIFTNKDDSSASRASLTSSTSPSQAPACSSLPSRAPQPSPSLHLFSTCRAPSRRLIRREFRSSPSAHHILHLAFGRKDSPAFFLHSTRSSIRRKQPLASADAFGKEMTSGGTIGTRGTPLFDEEAEVDPTTLDRWRLLTTRLTDEVLRDPPSTLCRTLIFPNEAFQSQCTHLYCKPCLAYIVATTHACPYDGYLVTEADSKPLLELNKSLAETIGKVQVYCLYHRSGCQWQGTLSDCINHCIGCNFGNSPVVCNRCGTQIVHRQVQEHAQTCPGLQPQGQQIDNVQVTVSPASNQDTTQNSSAALPAATPSSTAAATTVMSTSTATAASSISAPISVPAAASAPNSAVQVQNQAATVAYPQIGVQAPTVEQWYRQQQLQYQQYYQQYPGYDPYQQQYQQYGQYPQQTYQQYPQTHMQVAPQQVIQGQQLAQQQAQPYVQPQPQVQSHTPVQAQPQVHSTHLQTQQQQLVPQPQPQPQPQPQLQLQPQLNPHPQPQPQQPQPQPQPQPQSMSQPQLQPQPQPHSYLQPQPQLSAPPQPQPQPYPYSHPHPQPHPQSQLHSHSQPQLQTQLPHSQLPQAQHVSVQHSHQQVQPQVTPQVTQIPTHPGQPQYIQMQPYVQAQQPAHHSQQHQPSVLPQQQLPQPPAQHPQHHTQSQPRALPLSQAPYNQSQPQFQQPHTQQPRPLPQGQPQPLAHPQPQPQPQSQNPSAHAVTGHQSYPQLQSHQQMPHGMLQQRPMNLQQPGVSQQASQNQFPIHQAPQLRPPQTYMPPQTQQHSATHPQAQISFPNAASQPLPPHLAHQPGQQTHHSAGMQMQTQQLALPQQQALSQIPSAQHQGGLLPPSHSPQSLRPQAQSYIQSNGPVQGRSMASNQSQSQKVQHSPTKLIQSSMNQHSPNHNHAVRQLGSIHHESQDSVVPAPSRSGTETTQVSVSGSDHKSTALERPVDSVLDKANQGKPLEADAATGNAVGSETSRSSDPVNSKPEDDSKTLVDGETRSDVNETTETKESKDGFVSKHLKGVAADFQDGIGLKEAQGAEGKKNAIANSLAEGIAVDSVFDGPNAVQPLSGNINQFEKIDQVYSSRSKTTGNVANMAHASQSMPAGQQKLVEVHDKALAASGYHDKGLSQFLPPQLGAVGLHGISPVGALDHERCSQNIPHGHSTNIDAPIASQRPSGADGIFPQNMSLPTSSQARKFQEPFQQAMLGHGPSATPGQVWPPGYSENIHYPIQTAAMAEPFQPPAAKQPYISNILPKNAEEIVPFPIRNLSHGPLLNAIGPTAAQIDPLARSFMPGPPPGAFDAPSGMMARSSHFGYEDRAGRSGSVNLIEGPGYFDGKQSESHRPLLGEYSSFGQQTVMLPNMKMNGLSGKGPTGIMHDLSFSHGMPDERFQPPSGERFKPLLEESLRNAPAEIFRPVLESGWNISNRREFEEDLKQFPRSSHLDSDSAHKFNAYAPASRPIERGQHFGPDGGSRPFDRSLIGSFPRPHPPSGRFPPISGGLEFGPLEISGKQRVPPFHDDLSGKNDVHPDRLRPFSEFGRSHIDNLTSLKSPGARDSSGHFRKELDAFDATHSRVRASEHVTHGFANHIKVGEPFGTRNFPSHLMFNDSTHGPLRGSESIGFGGFGRIPVDDSGFSNSFPVHDSVSLHGDVNSFENLRKKHGSMGWCRLCKIDCETVEGLEVHSQTKDHQNMAMEIVLNIKKENAKKQKLSLFKLGEVVEFEVPATSWFWLVLKYRRGKCLMKEKHGSDALPR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	42.010
SRP064423	SRR2545915	Juvenile tuber	47.500
SRP108465	SRR5643513	five period of Gastrodia elata	21.080
	SRR5643514	five period of Gastrodia elata	22.260
	SRR5643515	five period of Gastrodia elata	23.860
	SRR5643524	five period of Gastrodia elata	22.370
	SRR5643525	five period of Gastrodia elata	18.940
	SRR5643528	five period of Gastrodia elata	15.310
	SRR5643658	five period of Gastrodia elata	17.200
	SRR5643659	five period of Gastrodia elata	37.230
	SRR5643660	five period of Gastrodia elata	40.970
	SRR5643661	five period of Gastrodia elata	38.220
	SRR5643662	five period of Gastrodia elata	30.630
	SRR5643663	five period of Gastrodia elata	35.040
	SRR5643664	five period of Gastrodia elata	29.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	36.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	31.920
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.870
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	35.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	38.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	39.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	33.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	33.440
SRP279888	Gastro	Gastrodia elata tuber	38.12
	Juven	Juvenile tuber	43.32
	Mother_Gastro	Mother tuber of Gastrodia elata	18.16
	Mother_Juven	Mother tuber of Juvenile	28.97