Gene detail

Detail information of GWHGAAEX009049/evm.TU.scaffold_232.6

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|728807023\|gb\|KHF97273.1\|	2.56E-62	hypothetical protein F383_36747 [Gossypium arboreum]
trEMBL	tr\|B9HC78\|B9HC78_POPTR	2.00E-59	Uncharacterized protein {ECO:0000313\|EMBL:EEE92628.2}
TAIR	AT3G54040	2.00E-48	PAR1 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000240	79964	82887	+

Transcript Sequence
>GWHTAAEX009049 AGAACAACAGGAAGAAAATAACAGAAGAAAAAGAAGAAATGGGGAGGTGGATTTGGGTTGCGAGCCTGCTGAGCGTCTCCCTTTCGTTCCTCCCGAGCTCTCTTGGCAGCGGGGTGATATGCGAGAGCTTGCCCGAAGATCTATGCGCCTTCTCGATATCTTGGGAGGGAAAACGATGCGTGCTGGAGAGCTACCGAAGGCGGAGCGGCGACAGCGGCAGAGAAACGACGGAGTACCACTGCAAGACGTCGGAGGTGATGGTGGAGAGAGCGTCGGATTGGATCGAAACGGACGAGTGCGTCAAGGCGTGCGGGGCGGAGCGGAGGGAGGTGGGCATCTCATCGGACGCACTTCTTGACCCCCGCCTCACCGCCAAGCTCTGCTCGCCAGCATGCTACGGTGACTGCCCCTTCGTCGTAGATCTCTATTTCAATCTCGCAGCAGGGGAAGGCGTCTCTCTTCCGGACCTGTGCGAGGCCCATCGATCCAACCCGCGCCGCTCCATTGCGGAGGCCATACAAAGTTCGGGATCGGCTGCCGCCGGCGACGCTGCTCCTTATCCCGCCCCTTCCCCTTGAATATTTTATTGTCCGCTCGCTGTTAAGTATGTGTTATACAAATTTACGAATTGGAGTGTTGTTTATTGAATGATCATGACCGAGGCCTTTTTTATCATCCTTGTACTCAAACTTATTATTTTGCTTTGATTCAGATCTCAGATCTCTTCTTTTAGGGTTCGTTGTTGCTCATTTATTTGATTGCGATAAAAGATGATCAAATTTTAATCTCCGGAGCCAATTGCTAACATAGCTAACAATCTACATAGTTCTTGGGCCATTCTTACGAACTTCAATTGTGTTTGCTATGCTAGTAAAAAGTGTCCTGGTGCTTCTATCCCTCCTTGCAAATTGACTTTATTTAATGAGGTCATAATTTTATTTAATGAGCTCATATTTAATCACCAAGCTGGTTTCCCTATAAAAGCTTAATTAGATAGAGTTTTATATAAGAAAAAAAAGAAGATTTAATGATATTCTTTTAAATAAAAACATTAATTTATATTTTAGGATTTCTTTTGAGATATTTATGAGTTTTATATTAAAATTTATTGGAAAAAGAGTTACATAAAATAATTTTTGCATATTTCTCCATTTTAGTTTCTCATTTAACATTTGAAATGATTGTTAAAATGTATTTTAGGTATTAGGAATCAAAAGTAGCAATTATGCAAGACTCAAAGATAAATAACTTAAATATTTTTCAATGGATAGCAATTAAGCAAGACTCAAAAGTAGCAATTAAGCAAGGGATCAAAAAATCATTTTCAAGAGTCAAAGATCATTTTCCATTATTTTGATAAATAACTTAAGAATAATGCTACAGTACCCCATCAATACCCCACAAATTTTACGATGACGTGGCAGCTGACGTGGAGGAGCATGCCACGTCAGCTGCATAACCTAAAATATTCGCATAACCTAACCTAGCCGACACCTTCGTCTGTTCGTCACTTCGTCGCTCCCTCTCATGGCTTCATCGCTTCGGTTTCGTCGCTCCCTCTCTCGTGGCTTCCTCGCTTCGGCTTCGTCGCGCTTGACTTAGTCTCTGGATCGTAGATCATAGATCCACCGATAGGCGACAGGAACCTTCTTCCTTCATCGAGTTCGACTTCTCCGCCTCAAGTTCAAGTTTGTTTTTTCACGTTCTTCTCCGTTAGCTCTAGTTTGTTATTATTTTTTCTTAATCTTATTTTTGATTCTTAAATCTTTTTCTTGGACAACTCCGCGTCCTCTTTGCTCGCCATGCTCTTCAGTTCTGGGTTTGCTTCTTAAGTTCGCCCTATGGCGGCACCCTCTTTGAATTTACACTAAATTTTCGGTTATTCTTATGTGTCATTTAAAGAGTTTGATGGTTATCAAATATATGAGTTTACACTAAATTTTACTATGAGTTTAGTGAGTTTCTTTTATTTTTGTGCTACATTAAATTTTAATCTTTTTCTTTAGAGCCAACAACAGTCATGGGTTCTATTAGATAAGCATTTTATCAGTGAGCTTCGTTTGACTTTAAATAGGGTTGAACTAGCCAGTAAAACTTAATCAAATCATTTTGTGCACATTCTTGACCTGTCAAATATAGAAGTAAATGGGGTGATTTAACTTTTTAAATCTCCTTTTTTTCTCATTAATAAATCTTACGTCACTGAATAAAGTAGAAATCATTTGATTCAACTTGCATCAAAACAGTCCATCAAAGCAGCAGTTTTTTATTTTGAGTTGCAGACTACATTCCAAATTATATAAGACTTTTTTCTGTCTTTGTTGTTGTCCTGTTATTGGCCTTAATTTTATGATGGAGGGTTATTGGCATGAGATAGAATTGTTTGCATTTTACTGAAATAAATCCAAGCTTATTATTTCTTATTTATGTTATGTGCTTTATGATAGCTATCCAATGAATGTTTCAACTTAATGCAACAACATTTTTGTGGTTTAATCAAGAAATAATCAAATTTGATCATGTAAGGCTAAAACGAATTTGCTTTAGTAGAGTTTGTTTGTGTGGAATTTGTAGGTGAGTTAGTGCCTTCACCATTGCCCATGAGCTTTTAACTTGAAATATGGGAATGAATTGTGATTCCACTAATAATAAATGTCATTATCTAATTTGATATAAGGGATCTGTTGAATGCTGAATGAGGGTCAGGGATCAAATGTAAGGAGAACTGCGAGGTAAAATTTATATGAATAGAATATTGAATTTTCATATTTCGGTAAGATCATCAACCTTAACAAAAGCAAAGCATTGTCCCTGAATGTGAACCACTATAGACATTCTTTTTAAATGAGATGC

Network for GWHGAAEX009049

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06521.10	PAR1	26	170	1.30E-62

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.740
SRP064423	SRR2545915	Juvenile tuber	19.390
SRP108465	SRR5643513	five period of Gastrodia elata	35.290
	SRR5643514	five period of Gastrodia elata	65.620
	SRR5643515	five period of Gastrodia elata	96.640
	SRR5643524	five period of Gastrodia elata	98.790
	SRR5643525	five period of Gastrodia elata	106.790
	SRR5643528	five period of Gastrodia elata	223.060
	SRR5643658	five period of Gastrodia elata	98.350
	SRR5643659	five period of Gastrodia elata	39.800
	SRR5643660	five period of Gastrodia elata	54.490
	SRR5643661	five period of Gastrodia elata	39.090
	SRR5643662	five period of Gastrodia elata	52.940
	SRR5643663	five period of Gastrodia elata	26.000
	SRR5643664	five period of Gastrodia elata	33.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	23.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	50.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.850
SRP279888	Gastro	Gastrodia elata tuber	85.26
	Juven	Juvenile tuber	26.77
	Mother_Gastro	Mother tuber of Gastrodia elata	644.41
	Mother_Juven	Mother tuber of Juvenile	1,189.87