Detail information of GWHGAAEX009050/evm.TU.scaffold_232.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|218781599|ref|YP_002432917.1| | 1.00E-05 | serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] |
| nr | gi|720002623|ref|XP_010256740.1| | 1.64E-158 | PREDICTED: probable serine/threonine-protein kinase At5g41260 [Nelumbo nucifera] |
| Swissprot | tr|Q9FHD7|Y5126_ARATH | 7.00E-139 | Probable serine/threonine-protein kinase At5g41260 |
| trEMBL | tr|A0A068UDG8|A0A068UDG8_COFCA | 4.00E-158 | Coffea canephora |
| TAIR | AT5G59010 | 6.00E-149 | Protein kinase protein with tetratricopeptide repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000240 | 95511 | 107881 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009050
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 14 | 123 | 1.90E-11 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005515 | Molecular Function | protein binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.490 |
| SRR2545915 | Juvenile tuber | 0.460 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.340 |
| SRR5643514 | five period of Gastrodia elata | 2.080 | |
| SRR5643515 | five period of Gastrodia elata | 2.020 | |
| SRR5643524 | five period of Gastrodia elata | 1.080 | |
| SRR5643525 | five period of Gastrodia elata | 0.510 | |
| SRR5643528 | five period of Gastrodia elata | 0.700 | |
| SRR5643658 | five period of Gastrodia elata | 0.600 | |
| SRR5643659 | five period of Gastrodia elata | 0.920 | |
| SRR5643660 | five period of Gastrodia elata | 0.700 | |
| SRR5643661 | five period of Gastrodia elata | 0.080 | |
| SRR5643662 | five period of Gastrodia elata | 0.540 | |
| SRR5643663 | five period of Gastrodia elata | 0.120 | |
| SRR5643664 | five period of Gastrodia elata | 0.500 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.920 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.930 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.060 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.850 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.560 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.720 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.370 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.370 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.84 |
| Juven | Juvenile tuber | 0.76 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.55 | |
| Mother_Juven | Mother tuber of Juvenile | 4.31 |