Detail information of GWHGAAEX009056/evm.TU.scaffold_232.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17673.00E-4940S ribosomal protein S25
nrgi|743764188|ref|XP_010912299.1|1.53E-53PREDICTED: 40S ribosomal protein S25 [Elaeis guineensis]
Swissprottr|Q9T029|RS254_ARATH9.00E-5040S ribosomal protein S25-4
trEMBLtr|A0A067JTS7|A0A067JTS7_JATCU5.00E-52Uncharacterized protein {ECO:0000313|EMBL:KDP27277.1}
TAIRAT4G392003.00E-49Ribosomal protein S25 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240247225251262-
Transcript Sequence

Network for GWHGAAEX009056

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03297.14Ribosomal_S2571053.80E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02975RP-S25e, RPS25 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms267.580
SRR2545915Juvenile tuber262.450
SRP108465SRR5643513five period of Gastrodia elata253.980
SRR5643514five period of Gastrodia elata242.550
SRR5643515five period of Gastrodia elata269.450
SRR5643524five period of Gastrodia elata264.830
SRR5643525five period of Gastrodia elata196.390
SRR5643528five period of Gastrodia elata199.060
SRR5643658five period of Gastrodia elata172.220
SRR5643659five period of Gastrodia elata318.760
SRR5643660five period of Gastrodia elata317.400
SRR5643661five period of Gastrodia elata342.340
SRR5643662five period of Gastrodia elata276.010
SRR5643663five period of Gastrodia elata272.310
SRR5643664five period of Gastrodia elata295.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1186.610
SRR6049655Rhizomagastrodiae_C368-T10_good_1329.710
SRR6049656Rhizomagastrodiae_C368-T07_good_1202.230
SRR6049657Rhizomagastrodiae_C368-T07_good_1235.940
SRR6049658Rhizomagastrodiae_C368-T04_good_1240.330
SRR6049659Rhizomagastrodiae_C368-T04_good_1253.710
SRR6049660Rhizomagastrodiae_C368-T01_good_1231.930
SRR6049661Rhizomagastrodiae_C368-T04_good_1231.980
SRR6049662Rhizomagastrodiae_C368-T01_good_1192.700
SRR6049663Rhizomagastrodiae_C368-T01_good_1211.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1203.370
SRR6049665Rhizomagastrodiae_C368-T10_good_1203.370
SRP279888GastroGastrodia elata tuber 295.67
JuvenJuvenile tuber250.61
Mother_GastroMother tuber of Gastrodia elata 116.26
Mother_JuvenMother tuber of Juvenile 156.69