Detail information of GWHGAAEX009058/evm.TU.scaffold_232.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|283781652|ref|YP_003372407.1|9.00E-26serine/threonine protein kinase [Pirellula staleyi DSM 6068]
nrgi|672124332|ref|XP_008785542.1|0PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like [Phoenix dactylifera]
Swissprottr|Q9M345|LRK42_ARATH0L-type lectin-domain containing receptor kinase IV.2 (Precursor)
trEMBLtr|A0A061EQW9|A0A061EQW9_THECC0Receptor lectin kinase {ECO:0000313|EMBL:EOY07455.1}
TAIRAT3G538100Concanavalin A-like lectin protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240286773289133+
Transcript Sequence

Network for GWHGAAEX009058

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00139.18Lectin_legB362803.70E-76
PF00069.24Pkinase3595637.30E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_L-LEC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0030246Molecular Functioncarbohydrate binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.850
SRR2545915Juvenile tuber2.480
SRP108465SRR5643513five period of Gastrodia elata16.700
SRR5643514five period of Gastrodia elata14.750
SRR5643515five period of Gastrodia elata20.090
SRR5643524five period of Gastrodia elata12.980
SRR5643525five period of Gastrodia elata4.660
SRR5643528five period of Gastrodia elata4.720
SRR5643658five period of Gastrodia elata3.830
SRR5643659five period of Gastrodia elata9.200
SRR5643660five period of Gastrodia elata5.390
SRR5643661five period of Gastrodia elata9.750
SRR5643662five period of Gastrodia elata4.510
SRR5643663five period of Gastrodia elata4.260
SRR5643664five period of Gastrodia elata6.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.680
SRR6049655Rhizomagastrodiae_C368-T10_good_126.900
SRR6049656Rhizomagastrodiae_C368-T07_good_133.360
SRR6049657Rhizomagastrodiae_C368-T07_good_123.580
SRR6049658Rhizomagastrodiae_C368-T04_good_122.760
SRR6049659Rhizomagastrodiae_C368-T04_good_119.680
SRR6049660Rhizomagastrodiae_C368-T01_good_139.350
SRR6049661Rhizomagastrodiae_C368-T04_good_127.040
SRR6049662Rhizomagastrodiae_C368-T01_good_126.280
SRR6049663Rhizomagastrodiae_C368-T01_good_139.170
SRR6049664Rhizomagastrodiae_C368-T10_good_128.750
SRR6049665Rhizomagastrodiae_C368-T10_good_128.750
SRP279888GastroGastrodia elata tuber 6.38
JuvenJuvenile tuber1.57
Mother_GastroMother tuber of Gastrodia elata 9.96
Mother_JuvenMother tuber of Juvenile 2.66