Detail information of GWHGAAEX009067/evm.TU.scaffold_232.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122549|ref|XP_008784608.1|1.77E-47PREDICTED: uncharacterized protein LOC103703512 [Phoenix dactylifera]
trEMBLtr|A0A059D5Q2|A0A059D5Q2_EUCGR4.00E-39Uncharacterized protein {ECO:0000313|EMBL:KCW85530.1}
TAIRAT5G594601.00E-12scarecrow-like transcription factor 11 (SCL11)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240496625513672+
Transcript Sequence

Network for GWHGAAEX009067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12593MPHOSPH6, MPP6 RNA degradation map03018

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.830
SRR2545915Juvenile tuber15.910
SRP108465SRR5643513five period of Gastrodia elata13.970
SRR5643514five period of Gastrodia elata17.240
SRR5643515five period of Gastrodia elata12.340
SRR5643524five period of Gastrodia elata16.900
SRR5643525five period of Gastrodia elata7.860
SRR5643528five period of Gastrodia elata8.470
SRR5643658five period of Gastrodia elata9.420
SRR5643659five period of Gastrodia elata10.780
SRR5643660five period of Gastrodia elata10.580
SRR5643661five period of Gastrodia elata12.290
SRR5643662five period of Gastrodia elata9.510
SRR5643663five period of Gastrodia elata9.310
SRR5643664five period of Gastrodia elata8.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.500
SRR6049655Rhizomagastrodiae_C368-T10_good_139.230
SRR6049656Rhizomagastrodiae_C368-T07_good_118.970
SRR6049657Rhizomagastrodiae_C368-T07_good_117.750
SRR6049658Rhizomagastrodiae_C368-T04_good_113.400
SRR6049659Rhizomagastrodiae_C368-T04_good_113.850
SRR6049660Rhizomagastrodiae_C368-T01_good_115.580
SRR6049661Rhizomagastrodiae_C368-T04_good_113.790
SRR6049662Rhizomagastrodiae_C368-T01_good_116.560
SRR6049663Rhizomagastrodiae_C368-T01_good_117.290
SRR6049664Rhizomagastrodiae_C368-T10_good_122.050
SRR6049665Rhizomagastrodiae_C368-T10_good_122.050
SRP279888GastroGastrodia elata tuber 11.95
JuvenJuvenile tuber15.28
Mother_GastroMother tuber of Gastrodia elata 8.35
Mother_JuvenMother tuber of Juvenile 8.84