Detail information of GWHGAAEX009070/evm.TU.scaffold_232.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34151.00E-60Putative Rab5-interacting protein
nrgi|672114462|ref|XP_008777096.1|3.50E-69PREDICTED: uncharacterized protein C20orf24 homolog [Phoenix dactylifera]
trEMBLtr|M0RHZ4|M0RHZ4_MUSAM2.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P13680_001}
TAIRAT5G594101.00E-60Rab5-interacting family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240546408552073-
Transcript Sequence

Network for GWHGAAEX009070

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07019.11Rab5ip411201.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.150
SRR2545915Juvenile tuber22.740
SRP108465SRR5643513five period of Gastrodia elata26.560
SRR5643514five period of Gastrodia elata25.770
SRR5643515five period of Gastrodia elata24.990
SRR5643524five period of Gastrodia elata24.560
SRR5643525five period of Gastrodia elata56.320
SRR5643528five period of Gastrodia elata66.330
SRR5643658five period of Gastrodia elata53.060
SRR5643659five period of Gastrodia elata22.800
SRR5643660five period of Gastrodia elata23.220
SRR5643661five period of Gastrodia elata19.600
SRR5643662five period of Gastrodia elata19.970
SRR5643663five period of Gastrodia elata18.560
SRR5643664five period of Gastrodia elata13.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.520
SRR6049655Rhizomagastrodiae_C368-T10_good_146.660
SRR6049656Rhizomagastrodiae_C368-T07_good_139.780
SRR6049657Rhizomagastrodiae_C368-T07_good_126.930
SRR6049658Rhizomagastrodiae_C368-T04_good_133.690
SRR6049659Rhizomagastrodiae_C368-T04_good_122.910
SRR6049660Rhizomagastrodiae_C368-T01_good_130.240
SRR6049661Rhizomagastrodiae_C368-T04_good_126.310
SRR6049662Rhizomagastrodiae_C368-T01_good_138.920
SRR6049663Rhizomagastrodiae_C368-T01_good_135.740
SRR6049664Rhizomagastrodiae_C368-T10_good_141.950
SRR6049665Rhizomagastrodiae_C368-T10_good_141.950
SRP279888GastroGastrodia elata tuber 30.72
JuvenJuvenile tuber17.98
Mother_GastroMother tuber of Gastrodia elata 111.23
Mother_JuvenMother tuber of Juvenile 50.05