Detail information of GWHGAAEX009077/evm.TU.scaffold_232.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47386.00E-07Predicted metallothionein
nrgi|743841812|ref|XP_010937631.1|1.00E-16PREDICTED: metallothionein-like protein type 2 [Elaeis guineensis]
Swissprottr|Q0IMG5|MT4A_ORYSJ3.00E-18Metallothionein-like protein 4A
trEMBLtr|I3QP00|I3QP00_ELAGV3.00E-13Metallothionein type 2a-FL {ECO:0000313|EMBL:AFK13198.1}
TAIRAT3G093906.00E-07metallothionein 2A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240688984690115-
Transcript Sequence

Network for GWHGAAEX009077

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01439.17Metallothio_21783.60E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms545.200
SRR2545915Juvenile tuber532.400
SRP108465SRR5643513five period of Gastrodia elata2895.290
SRR5643514five period of Gastrodia elata4676.510
SRR5643515five period of Gastrodia elata3427.640
SRR5643524five period of Gastrodia elata3493.540
SRR5643525five period of Gastrodia elata26431.900
SRR5643528five period of Gastrodia elata16083.300
SRR5643658five period of Gastrodia elata11942.100
SRR5643659five period of Gastrodia elata833.060
SRR5643660five period of Gastrodia elata314.860
SRR5643661five period of Gastrodia elata649.070
SRR5643662five period of Gastrodia elata1925.670
SRR5643663five period of Gastrodia elata1411.510
SRR5643664five period of Gastrodia elata1610.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12103.490
SRR6049655Rhizomagastrodiae_C368-T10_good_12461.890
SRR6049656Rhizomagastrodiae_C368-T07_good_12366.570
SRR6049657Rhizomagastrodiae_C368-T07_good_11566.060
SRR6049658Rhizomagastrodiae_C368-T04_good_12090.570
SRR6049659Rhizomagastrodiae_C368-T04_good_12422.270
SRR6049660Rhizomagastrodiae_C368-T01_good_11654.200
SRR6049661Rhizomagastrodiae_C368-T04_good_11890.600
SRR6049662Rhizomagastrodiae_C368-T01_good_13161.440
SRR6049663Rhizomagastrodiae_C368-T01_good_12140.870
SRR6049664Rhizomagastrodiae_C368-T10_good_13641.350
SRR6049665Rhizomagastrodiae_C368-T10_good_13641.350
SRP279888GastroGastrodia elata tuber 4,501.69
JuvenJuvenile tuber1,036.98
Mother_GastroMother tuber of Gastrodia elata 7,489.71
Mother_JuvenMother tuber of Juvenile 2,191.15