Gene detail

Detail information of GWHGAAEX009079/evm.TU.scaffold_232.38

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743841815\|ref\|XP_010937632.1\|	8.78E-93	PREDICTED: uncharacterized protein LOC105056945 [Elaeis guineensis]
Swissprot	tr\|F4HSD5\|TRM32_ARATH	7.00E-12	Protein TRM32
trEMBL	tr\|M0UAC3\|M0UAC3_MUSAM	3.00E-45	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP18640_001}
TAIR	AT5G02390	1.00E-14	Protein of unknown function (DUF3741)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000240	710468	715696	-

Transcript Sequence
>GWHTAAEX009079 ACAAAACAAAACAAAAACAAAAAATTTGTCTAAACACTGGCGAGGATTGAGAACAACTGATAAGGAAATTTATAAATCTTTAATCCTTCTCAATTCAATTTATGAAGCTTCTCCGATCAGTAACCCTAGTTTGATTTTTGGTGCTTTTCATCCATCTTGCGGTGCCGGAGAAGCTCGCGCTGAAATTTGATCTGCTGGAAGGAGGTTATATAATTAATTCCTTAGGTTGATTTTGCCCGAATGGCAGAACTTACGCAGCTTGACAGCGCAAAACTGTATGGGAACAACAATTCAGGTTGTATTTGGGGATTGTTTCATATTTTCGACTTTTACAGCAGGCGTCCCAGCAAAAGGCTTCTTTCATACCGGAAGCTTGGACTGGATGCTGACCAGCGTAATTTGAGAATTGATAATGTTGCTGCAAATGATAAATCTGGAGGAGGAGATGCTGTTGTAGTCAAAGAAGAAAATGACGGAGCCGAAATTAAGACCAGCGCCATGAACAAACGTTCGAGCAGGACACGCATATTGAATTTCATTAGCAAGAAGCTGTTGAAAAGGCAAAAGCGCACAGGAAAAATGTCTCATTCATCAGCACAGCTAAAGAAATCTGTCTCTATCCACCGTTCAGAAAGTAATGATTCTGAATCACTTGGCGAGTTGTGTCAAATGACTACAGACGGTGAGACTTCTACCGTTACACTCAGTTTAGATGAGATGGGTTCTTTGGCAGCAAATGCGCATGAAACCCTAGAAGTTAACGAGCTACAAAGGTTTGTCAACGAGAAGCGAGGAGCATTTGGAACAATGGATACGGTCAATGATATCAGTTCTGAATCACACATGCTTGATGATCTGGGAAATTATTTGCTAAATGAGCATACAGTTCTAAAGAAGAAAATATTTGAGGCGAGGGATGCCCTCTTAAAGCAAAAGGATTCTGATCCCAAGGGCGTGACACTAGAGTTTTGTCTGCTATCAAAGTTCTTTCTTGATACATTACATCTATTCAATACCAATAGGGAAGCTCTTTATAGTGCATTGAAAAGTCAAAACACTTTCTCGTCAAATGATACAAAAGGATTGGGGTGCCATGATAAAGCCAGAGCATTAAACAGGTCTGTTTCACTTTCAGGATTTGACTTGCCTGTAAATGCTGCTGGATTTCCTATTCCAAGTCATAAGCGGAGAGTGGATGATTCTCTTATTAATCAAGGATCCAAATCTCAATCAGCCGATCTACAAATTAAGACTTTTGGAGATGTTCCCGGGATTGAAGTCTTACCTGGCTCTAATGAACTTGAAAGCCAAGGAGAGACCAAAATTGTGTCAAGTCAATTGAGGGAACTGAAACATAGCATAAAGAGTGAACTTCTGGTTAATAAAATGGAGCACCATCGAATATCTATGGACAGGATCTTGGATAAAGTTCCTTTGGGGCATAGTCTGCTGGGAGATGAGGAGGGCGATAAGATGCGTCTAAGAGAAGGATCTGTTCACGAAAAATACTCTTACAAAGGTGTCCAAGGTTTCAAATTCAATAGAGTGACACCTGTTATTTCTTCTATTGGCAAACTTGATCATGACAGAGTTCGAAGATCACACTCATTTGATGATTCCTTAGATAGATACTCTCATCTGTTGGATTCTATCACAGACGTTAAAGTGAGAAAAGTTCCCGATAGATCAAAATCAACCAGCGAATTCAGTGGTTCAAGGAAGCGGGAGCAATCAAAAACCCATCGAAGAATGATGTCCAACCCTGACTTTCTTGGGTCGGATTCTTTCACAAAGGATGTGCAAAACGAAGTGCATCCTGAATTTCAATCATCAAATGATTCCACATTTGAACATCTTGACTGCGACTTGAAATCAACCGCATGTAGTTTTGATAAACTTGATGGGGATTTAGTAGTGCTGCCTGCAACAGAAGAAGTTACTGATATGCCAGAGGAGTCCAATGAATCTAGCATTGCAGTTAAAACGGAAGTTTCAGACGTAATTGTAATCCCTACTGCAAAAACAAGTTCTAATGAGATGAAAGAGCAAGAGAAAGTTCCAGATTCTGCAAATGGGTGTCTTCAGACCACGCCCTTCCAGTTTTCAAAAATTGTGCAACAGAAAAGCGGCTTTGTGGAAGAGCAGAGGATTCAAATCGAAGATAAACTGAACATCAAGCCTGAAACAAGAAGTCCCATCTCAGTTCTGGACACTAACATTGAAGAACCTGTTAGTCCTTTAAAATTAACTGTCTTGGAAGGTTCAGACGTGCAACAGTTACATAAAATCCTTGAAGAACAATTTACACGCCGTAAAATTCAGGATGATGTAGATTCCAACGAGCTCAATGTTGCAGAATTGTTTGAGGTCAATGAAACAAATTCATTCCTTGCTAATGCCGACGACAAAGACACCGCCATATTTAATTATGTGAAGCACATATTGAATAATTCGGGTTATGAAGCGCTGTTTTGCGAGGCTGAGGACCCATCCAATCAAATAGATGCTTGGAGCCACATTTTTGTCGACATTCCTTTTGAGGAGCAGCTCATTTTTGAATTGATAAATGAAGTGCTATTCGAAATTTATGAGTATTCCACAGCTCCTAGCAGTTGGCTCTCTCGCTTTCATTCTAAGAATCGATCAATGCCTGCTGGAAGTTACCTTCTTGAAGAAGTGTGGACTGAGATCAGATGGCATATTTGTTCACCACATGAATATGGTGCCAATGTCGATGAGATTTTGGCCCGAAATTTTACAAAAACGGATGGCTGGATGAACCTCTACCGTGATGCTGAGTGCTTTGGAATGCTGTTGGAGCAGGTGGTATTGGATGATTTAGTTGATGAAGTTATTCAGGATATTTATTATGAGCTTTGAAAGTATTGGTATTTCTTCAATGCAGTTCTTTATGTTCATAGATTTTGTATCATGTATATCAATTTTGTATACAAACGTTACATCTTGTTTTCTTTCTTACAGTGCTTTTAAAAGTGTAAGAAATTCCTTTTGTAAATTTTTTTTATTACAAAATGGATTAATTGAAGCATGTACTTTGAA

Network for GWHGAAEX009079

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14309.5	DUF4378	767	870	1.50E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.930
SRP064423	SRR2545915	Juvenile tuber	4.930
SRP108465	SRR5643513	five period of Gastrodia elata	6.740
	SRR5643514	five period of Gastrodia elata	6.990
	SRR5643515	five period of Gastrodia elata	7.800
	SRR5643524	five period of Gastrodia elata	6.340
	SRR5643525	five period of Gastrodia elata	5.790
	SRR5643528	five period of Gastrodia elata	4.750
	SRR5643658	five period of Gastrodia elata	3.990
	SRR5643659	five period of Gastrodia elata	3.660
	SRR5643660	five period of Gastrodia elata	3.430
	SRR5643661	five period of Gastrodia elata	3.360
	SRR5643662	five period of Gastrodia elata	5.630
	SRR5643663	five period of Gastrodia elata	4.530
	SRR5643664	five period of Gastrodia elata	7.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.330
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.080
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.550
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.600
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.050
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.120
SRP279888	Gastro	Gastrodia elata tuber	7.70
	Juven	Juvenile tuber	3.81
	Mother_Gastro	Mother tuber of Gastrodia elata	14.20
	Mother_Juven	Mother tuber of Juvenile	11.71