Detail information of GWHGAAEX009081/evm.TU.scaffold_232.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16391.00E-162Steroid reductase required for elongation of the very long chain fatty acids
nrgi|584294211|gb|AHI86054.1|1.01E-174enoyl-ACP reductase [Vernicia fordii]
Swissprottr|Q9M2U2|ECR_ARATH3.00E-163Very-long-chain enoyl-CoA reductase
trEMBLtr|W6CJG3|W6CJG3_VERFO4.00E-175Enoyl-ACP reductase {ECO:0000313|EMBL:AHI86054.1}
TAIRAT3G553601.00E-1623-oxo-5-alpha-steroid 4-dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240748213757032-
Transcript Sequence

Network for GWHGAAEX009081

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02544.15Steroid_dh1633141.60E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10258TER, TSC13, CER10 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.780
SRR2545915Juvenile tuber44.660
SRP108465SRR5643513five period of Gastrodia elata98.380
SRR5643514five period of Gastrodia elata84.140
SRR5643515five period of Gastrodia elata98.510
SRR5643524five period of Gastrodia elata94.010
SRR5643525five period of Gastrodia elata84.750
SRR5643528five period of Gastrodia elata77.980
SRR5643658five period of Gastrodia elata75.520
SRR5643659five period of Gastrodia elata84.830
SRR5643660five period of Gastrodia elata80.180
SRR5643661five period of Gastrodia elata90.280
SRR5643662five period of Gastrodia elata51.520
SRR5643663five period of Gastrodia elata62.710
SRR5643664five period of Gastrodia elata51.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_181.800
SRR6049655Rhizomagastrodiae_C368-T10_good_1101.710
SRR6049656Rhizomagastrodiae_C368-T07_good_192.170
SRR6049657Rhizomagastrodiae_C368-T07_good_179.470
SRR6049658Rhizomagastrodiae_C368-T04_good_176.360
SRR6049659Rhizomagastrodiae_C368-T04_good_178.550
SRR6049660Rhizomagastrodiae_C368-T01_good_180.080
SRR6049661Rhizomagastrodiae_C368-T04_good_191.250
SRR6049662Rhizomagastrodiae_C368-T01_good_1121.210
SRR6049663Rhizomagastrodiae_C368-T01_good_199.160
SRR6049664Rhizomagastrodiae_C368-T10_good_195.520
SRR6049665Rhizomagastrodiae_C368-T10_good_195.520
SRP279888GastroGastrodia elata tuber 44.19
JuvenJuvenile tuber47.81
Mother_GastroMother tuber of Gastrodia elata 122.68
Mother_JuvenMother tuber of Juvenile 92.18