Detail information of GWHGAAEX009083/evm.TU.scaffold_232.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695055870|ref|XP_009416134.1|1.54E-66PREDICTED: dof zinc finger protein DOF3.6-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M2U1|DOF36_ARATH4.00E-54Dof zinc finger protein DOF3.6
trEMBLtr|A0A067L975|A0A067L975_JATCU2.00E-63Uncharacterized protein {ECO:0000313|EMBL:KDP44967.1}
TAIRAT3G553701.00E-49OBF-binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000240842219843405-
Transcript Sequence

Network for GWHGAAEX009083

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof691242.60E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.220
SRR2545915Juvenile tuber6.290
SRP108465SRR5643513five period of Gastrodia elata7.170
SRR5643514five period of Gastrodia elata8.330
SRR5643515five period of Gastrodia elata5.680
SRR5643524five period of Gastrodia elata6.730
SRR5643525five period of Gastrodia elata49.530
SRR5643528five period of Gastrodia elata24.550
SRR5643658five period of Gastrodia elata21.160
SRR5643659five period of Gastrodia elata4.530
SRR5643660five period of Gastrodia elata5.660
SRR5643661five period of Gastrodia elata4.540
SRR5643662five period of Gastrodia elata10.880
SRR5643663five period of Gastrodia elata6.650
SRR5643664five period of Gastrodia elata9.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.930
SRR6049655Rhizomagastrodiae_C368-T10_good_112.560
SRR6049656Rhizomagastrodiae_C368-T07_good_19.590
SRR6049657Rhizomagastrodiae_C368-T07_good_111.640
SRR6049658Rhizomagastrodiae_C368-T04_good_117.660
SRR6049659Rhizomagastrodiae_C368-T04_good_116.360
SRR6049660Rhizomagastrodiae_C368-T01_good_112.790
SRR6049661Rhizomagastrodiae_C368-T04_good_115.640
SRR6049662Rhizomagastrodiae_C368-T01_good_112.600
SRR6049663Rhizomagastrodiae_C368-T01_good_19.410
SRR6049664Rhizomagastrodiae_C368-T10_good_112.120
SRR6049665Rhizomagastrodiae_C368-T10_good_112.120
SRP279888GastroGastrodia elata tuber 19.53
JuvenJuvenile tuber8.59
Mother_GastroMother tuber of Gastrodia elata 13.09
Mother_JuvenMother tuber of Juvenile 9.96