Detail information of GWHGAAEX009099/evm.TU.scaffold_234.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG48439.00E-130Uncharacterized conserved protein
nrgi|743794381|ref|XP_010924156.1|0PREDICTED: uncharacterized protein LOC105047065 isoform X1 [Elaeis guineensis]
trEMBLtr|M0RTM8|M0RTM8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P19480_001}
TAIRAT5G084509.00E-130Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000230752050789494-
Transcript Sequence

Network for GWHGAAEX009099

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08642.9Rxt35455877.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016575Biological Processhistone deacetylation

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.540
SRR2545915Juvenile tuber30.490
SRP108465SRR5643513five period of Gastrodia elata20.460
SRR5643514five period of Gastrodia elata16.660
SRR5643515five period of Gastrodia elata18.190
SRR5643524five period of Gastrodia elata17.230
SRR5643525five period of Gastrodia elata17.410
SRR5643528five period of Gastrodia elata16.230
SRR5643658five period of Gastrodia elata19.690
SRR5643659five period of Gastrodia elata16.430
SRR5643660five period of Gastrodia elata16.680
SRR5643661five period of Gastrodia elata15.210
SRR5643662five period of Gastrodia elata17.360
SRR5643663five period of Gastrodia elata16.720
SRR5643664five period of Gastrodia elata20.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.320
SRR6049655Rhizomagastrodiae_C368-T10_good_117.100
SRR6049656Rhizomagastrodiae_C368-T07_good_118.730
SRR6049657Rhizomagastrodiae_C368-T07_good_125.470
SRR6049658Rhizomagastrodiae_C368-T04_good_126.670
SRR6049659Rhizomagastrodiae_C368-T04_good_133.010
SRR6049660Rhizomagastrodiae_C368-T01_good_123.100
SRR6049661Rhizomagastrodiae_C368-T04_good_121.770
SRR6049662Rhizomagastrodiae_C368-T01_good_117.200
SRR6049663Rhizomagastrodiae_C368-T01_good_116.760
SRR6049664Rhizomagastrodiae_C368-T10_good_115.080
SRR6049665Rhizomagastrodiae_C368-T10_good_115.080
SRP279888GastroGastrodia elata tuber 20.04
JuvenJuvenile tuber28.41
Mother_GastroMother tuber of Gastrodia elata 18.39
Mother_JuvenMother tuber of Juvenile 33.46