Detail information of GWHGAAEX009105/evm.TU.scaffold_235.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3144 | 3.00E-24 | Ethanolamine-P-transferase GPI11/PIG-F, involved in glycosylphosphatidylinositol anchor biosynthesis |
| nr | gi|672126465|ref|XP_008786684.1| | 3.21E-86 | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein [Phoenix dactylifera] |
| trEMBL | tr|M0SS08|M0SS08_MUSAM | 6.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P25470_001} |
| TAIR | AT1G16050 | 3.00E-24 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000245 | 256580 | 263627 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009105
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06699.10 | PIG-F | 39 | 202 | 6.80E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05287 | PIGF | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.970 |
| SRR2545915 | Juvenile tuber | 8.570 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.000 |
| SRR5643514 | five period of Gastrodia elata | 16.500 | |
| SRR5643515 | five period of Gastrodia elata | 10.260 | |
| SRR5643524 | five period of Gastrodia elata | 16.010 | |
| SRR5643525 | five period of Gastrodia elata | 5.530 | |
| SRR5643528 | five period of Gastrodia elata | 4.670 | |
| SRR5643658 | five period of Gastrodia elata | 5.770 | |
| SRR5643659 | five period of Gastrodia elata | 5.610 | |
| SRR5643660 | five period of Gastrodia elata | 6.430 | |
| SRR5643661 | five period of Gastrodia elata | 5.780 | |
| SRR5643662 | five period of Gastrodia elata | 5.370 | |
| SRR5643663 | five period of Gastrodia elata | 7.630 | |
| SRR5643664 | five period of Gastrodia elata | 5.300 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.870 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.950 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.020 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.07 |
| Juven | Juvenile tuber | 13.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.51 | |
| Mother_Juven | Mother tuber of Juvenile | 14.70 |