Detail information of GWHGAAEX009108/evm.TU.scaffold_235.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695079051|ref|XP_009386932.1|1.42E-20PREDICTED: transcription factor RF2b-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q6S4P4|RF2B_ORYSJ5.00E-11Transcription factor RF2b
trEMBLtr|M0S974|M0S974_MUSAM4.00E-15Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18830_001}
TAIRAT2G406204.00E-07Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000245314167314737+
Transcript Sequence

Network for GWHGAAEX009108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.810
SRR2545915Juvenile tuber10.600
SRP108465SRR5643513five period of Gastrodia elata16.320
SRR5643514five period of Gastrodia elata12.730
SRR5643515five period of Gastrodia elata10.050
SRR5643524five period of Gastrodia elata12.340
SRR5643525five period of Gastrodia elata8.770
SRR5643528five period of Gastrodia elata6.200
SRR5643658five period of Gastrodia elata6.410
SRR5643659five period of Gastrodia elata14.110
SRR5643660five period of Gastrodia elata19.360
SRR5643661five period of Gastrodia elata12.030
SRR5643662five period of Gastrodia elata11.160
SRR5643663five period of Gastrodia elata10.640
SRR5643664five period of Gastrodia elata16.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.640
SRR6049655Rhizomagastrodiae_C368-T10_good_124.640
SRR6049656Rhizomagastrodiae_C368-T07_good_114.940
SRR6049657Rhizomagastrodiae_C368-T07_good_132.660
SRR6049658Rhizomagastrodiae_C368-T04_good_117.670
SRR6049659Rhizomagastrodiae_C368-T04_good_117.880
SRR6049660Rhizomagastrodiae_C368-T01_good_118.180
SRR6049661Rhizomagastrodiae_C368-T04_good_112.150
SRR6049662Rhizomagastrodiae_C368-T01_good_117.330
SRR6049663Rhizomagastrodiae_C368-T01_good_114.470
SRR6049664Rhizomagastrodiae_C368-T10_good_114.490
SRR6049665Rhizomagastrodiae_C368-T10_good_114.490
SRP279888GastroGastrodia elata tuber 14.91
JuvenJuvenile tuber30.17
Mother_GastroMother tuber of Gastrodia elata 13.16
Mother_JuvenMother tuber of Juvenile 12.24