Detail information of GWHGAAEX009112/evm.TU.scaffold_235.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|1.00E-25serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|225428322|ref|XP_002282994.1|0PREDICTED: calcium-dependent protein kinase 26 isoform X2 [Vitis vinifera]
Swissprottr|A5A7I8|CDPK5_SOLTU0Calcium-dependent protein kinase 5
trEMBLtr|F6I0Q9|F6I0Q9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60525.1}
TAIRAT2G172900Calcium-dependent protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000245512399552796-
Transcript Sequence

Network for GWHGAAEX009112

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase803381.90E-70
PF13499.5EF-hand_73864464.80E-10
PF13499.5EF-hand_74565171.20E-13
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.620
SRR2545915Juvenile tuber6.850
SRP108465SRR5643513five period of Gastrodia elata7.530
SRR5643514five period of Gastrodia elata7.290
SRR5643515five period of Gastrodia elata9.290
SRR5643524five period of Gastrodia elata6.950
SRR5643525five period of Gastrodia elata7.230
SRR5643528five period of Gastrodia elata7.600
SRR5643658five period of Gastrodia elata8.110
SRR5643659five period of Gastrodia elata5.840
SRR5643660five period of Gastrodia elata4.650
SRR5643661five period of Gastrodia elata6.150
SRR5643662five period of Gastrodia elata4.110
SRR5643663five period of Gastrodia elata5.900
SRR5643664five period of Gastrodia elata4.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.740
SRR6049655Rhizomagastrodiae_C368-T10_good_17.490
SRR6049656Rhizomagastrodiae_C368-T07_good_18.170
SRR6049657Rhizomagastrodiae_C368-T07_good_110.630
SRR6049658Rhizomagastrodiae_C368-T04_good_110.120
SRR6049659Rhizomagastrodiae_C368-T04_good_112.490
SRR6049660Rhizomagastrodiae_C368-T01_good_110.450
SRR6049661Rhizomagastrodiae_C368-T04_good_111.400
SRR6049662Rhizomagastrodiae_C368-T01_good_14.720
SRR6049663Rhizomagastrodiae_C368-T01_good_16.380
SRR6049664Rhizomagastrodiae_C368-T10_good_16.710
SRR6049665Rhizomagastrodiae_C368-T10_good_16.710
SRP279888GastroGastrodia elata tuber 4.31
JuvenJuvenile tuber5.29
Mother_GastroMother tuber of Gastrodia elata 9.11
Mother_JuvenMother tuber of Juvenile 9.10