Detail information of GWHGAAEX009114/evm.TU.scaffold_235.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332666557|ref|YP_004449345.1|2.00E-125beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
KOGKOG06264.00E-154Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
nrgi|695033570|ref|XP_009404265.1|4.27E-178PREDICTED: beta-glucosidase 12-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q42707|F26G_CHESP4.00E-178Furostanol glycoside 26-O-beta-glucosidase {ECO:0000303|PubMed:8766714} (Precursor)
trEMBLtr|M0T6D9|M0T6D9_MUSAM2.00E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P12410_001}
TAIRAT1G265604.00E-154beta glucosidase 40

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000245628075655620+
Transcript Sequence

Network for GWHGAAEX009114

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00232.17Glyco_hydro_1665582.40E-154
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01188E3.2.1.21 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms953.490
SRR2545915Juvenile tuber1590.770
SRP108465SRR5643513five period of Gastrodia elata1057.460
SRR5643514five period of Gastrodia elata2007.010
SRR5643515five period of Gastrodia elata1687.450
SRR5643524five period of Gastrodia elata1619.140
SRR5643525five period of Gastrodia elata96.980
SRR5643528five period of Gastrodia elata80.660
SRR5643658five period of Gastrodia elata129.830
SRR5643659five period of Gastrodia elata847.990
SRR5643660five period of Gastrodia elata591.300
SRR5643661five period of Gastrodia elata562.890
SRR5643662five period of Gastrodia elata433.230
SRR5643663five period of Gastrodia elata1116.870
SRR5643664five period of Gastrodia elata383.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11976.920
SRR6049655Rhizomagastrodiae_C368-T10_good_11899.270
SRR6049656Rhizomagastrodiae_C368-T07_good_11606.380
SRR6049657Rhizomagastrodiae_C368-T07_good_11487.890
SRR6049658Rhizomagastrodiae_C368-T04_good_1517.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1439.440
SRR6049660Rhizomagastrodiae_C368-T01_good_1784.440
SRR6049661Rhizomagastrodiae_C368-T04_good_1483.050
SRR6049662Rhizomagastrodiae_C368-T01_good_1612.640
SRR6049663Rhizomagastrodiae_C368-T01_good_1335.730
SRR6049664Rhizomagastrodiae_C368-T10_good_11553.650
SRR6049665Rhizomagastrodiae_C368-T10_good_11553.650
SRP279888GastroGastrodia elata tuber 249.28
JuvenJuvenile tuber383.09
Mother_GastroMother tuber of Gastrodia elata 69.84
Mother_JuvenMother tuber of Juvenile 73.65