Gene detail

Detail information of GWHGAAEX009122/evm.TU.scaffold_236.3

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0165	2.00E-121	Microtubule-associated protein Asp
nr	gi\|672184265\|ref\|XP_008812438.1\|	0	PREDICTED: abnormal spindle-like microcephaly-associated protein homolog [Phoenix dactylifera]
trEMBL	tr\|M0TB84\|M0TB84_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P29390_001}
TAIR	AT4G21820	2.00E-121	binding;calmodulin binding

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000232	128328	170161	+

Transcript Sequence
>GWHTAAEX009122 CCCGATTCAATATTTGAAGCATTCCATCATCTTCTACCCAATTTCTTAACGATGGAACGCTGCCGGCCTCCAGAACGCGACGCCCGCGCTCCGTCAACCCCTGCTCTCTTACTCCGCGACGTCTCCAATCTAAAAACGCCGAGGCCGTGCCCTAGAATTCCCTACCCTAACCCTAATCTCGCCTCACCTTCCTCGCACTTCTTTACAGCTTCAAAGAAGACACCGCATTCTTCTTACCACACTCCCATCTCTTCTACTTCGCATTCAACCTTCCGTCACCGCACACCTTCCTTCACCGCCTCCGCCTCTCGCTCAAAAACTGCGCGCCGGCTCAACGCTCTCAAGATTGAACAAACCCGATCGGCTAGGAAGGCTCAGTCCCGCCGTGAGAAGAAAGTGGCATCCTTCGCTAGGTCTCTCAGGGCCTGGCTTAACTTCTTGCTGCAGAATCCCAAGGCTTGTGGCTGCAAGATCGGATTCTGTGAAGCGGATGGGCAACCAACGGGTTCAATTTCGAAAGGAAAGGGAAAGCGCTCGGTTGACATCCGCTTGTCGGTAGCGAAGCCGACGATGACTTTACTTGACAAGTCGCTCTCCAAGGTATGCAGCCTGGAGGATCTGTGCGAGAGGATGACGCTTCACATGAGTTCGAAAGGCTGCAATGAAGTTTTGTTGATGATGTCTCAAGTTTGCAAGAATATTGATGAAGGGAGACTGAAGATGAAACCACATTGTCCTCTAGTTACTGATCTAGCTGTTAAAGAAAGGGCAATCAAAACGCTCATGTGCTATAATCCTTATTGGCTCAAGAAAGGGTTGCATATTCTTTTCGGAGGCGACTCTTTATTGCTTAATCATGGAGATCTAGATGAACACTTTCTGAAAGAATTCTTAGAGAAACACTTTCTTACGTATGCGGGTATTGCTAGAACTCATAAATTAGTTGGTGGCCTTTACAGACCTGGTTACTATGAAGCTTTAGGAAAGGCGATCCTGAAAAGATTCTTGCTACTTTCAATCGCACTTGATAAAGCTAAATGTGAGAGTAGTCTTCCTATTAACTATGGAGTTGACAACATAGATGGAGGTTCTCCACTTTTATTCAATCTTCACTCAAGCATTAAATCAACCAGACATATTATCATAGAGTTCTTGATGGATTCAATGCATGGAGAAGGTGATCTTCTTTCTCATCTTTTAATTATGGGATATAAGGTTAATTATCAACAGTCTCCACTTTGTGAATGTGACTTCAAAGTTAAAAATATATTTGAAGATCTTCAGGATGGCATATTGCTGTGTAGAGTGGTTCAACTTTTACTGTGCAATGAAACAATCCTCTCTAAAATGGTCTGTCCCTCTGATACCCCAAAGAAGAAATTGCAAAATTGTAGCACAGCCATGAAGCATCTGAAAGATTCTGGTGTCCAGATGTCTGATTCAGATGGTTTTTTTATTACTGCAACAGATCTTGTCAACGGGGAAAAGGAGCTTACTTGTTCTCTCCTTTGGAACGTGTTTATCTGCTTGCAGGTGCCATTGCTTATCAACAAAACTTCATTGCTCACGGAGATTGCAAAGATCAAGGGTACTGAAACGGAACTCATGAAGTATGATGCTTGTAATGAAATGAGCCTTCTTCTTTGCTGGATTCAGGCTGTTTGTGCCATGCAAAATATGGAGGTCGACGGATTTTCTTCTCTCACTGATGGGAAGGCTTTGACTTGTTTGATCAAATTTTATCTTGGGAATAGTGTTCATCCATCATCTGTAGAAAAGGAAAATAAGAACGAACGCAACTATCCCCCTACTCTCCTTGGCATTGAGTATGTCCAATATGTAACTGCAATGCTGGGAAACTATCCTGAGTGGGTATTGCATCCGTGTGACATATTTGACGAGGATGAGGATCAAAAAATTGATGAAAGGAGCGCAGTGATTGTTCTTGTTTTTCTAGCTTTTCGATTGATCTCTACAGATAAATTGCGGCCATGTGTTTCTTTAAAATATCCCATAATTTCTGGAAATAATGTGAAAAAGTTATGCTGTTCACATGGGGAAGATCTTGCCAGACATTTATCTGAAGAAAGTTCTGCAAGAGTTATACAAGCACGATACAGAGGATTTATTAAAAGAAAACACTTCTTGAAGATGAAAATGGCTGCCATCTTCCTTCAGTCTGTTATAAGGGCTTGGCTAGCTGTCAGATTTGACTGTGAATCAAAGCATGCTACACTGATTTGTTCTCCTCTGCGTTCAACAAATGGAATATATGACAGATACCTCTTGCTCTTGATTGAGAGGCAAAAGTTTCGAAAAGCTAGAAATGCTGTTATTCTAATTCAACGATATGTGCGGGCTTGGATCAAAAGAAAGCAGCATAATTCAAAGCTTATGAATTTGAAGATTAGTGCATCAGAAATCCCAGGAGCAGTAGAATTTTCATACTCCTCTTGCTGTAATATTACTAAGCTTGAAATTATGCTGAAACAATCAGCAAATGGTGATGAAAATGAAACTCTGGAGCAACAATGGAGGGCAGTTACAAAGATACAGGAAGCTTGGAAGATTTTTCAGCATAACATACGCTCAAAAAGAAGCCATTCTGCAACAAAAATTCAGTCTCAGTGGCGTCGTTGGTTAATCAGAAAAGATTACCTTTTCCAAGTTGGAGCAATCAAATTAATCCAGTCAGTTGTTCGAAGTTCTAGGGCTCAAAGTGCATTTCAACTGAAACAACTTGCTGCAATTGAAATCCAAAGATTCATTCGGGGGCAGCTTGCACGAACCAAATTGCTTGGTGCTTATAGCCATGAATATGTCACACTACATCGAAGGTCTTATGATGCGATAAGTGATGGCTTCATGAACAATTTTGAGTTGAGAATACTCCATTACTCTATAGTAAAACTTCAAAGATGGTGGAAACGGCTGTTATTGCATAGGTCCAGAAGGCATGCGGCTATCTCAATTCAATCTATTGCTCGCAGTTGGATTGCACGAAGGGCTGCTGCTAAGAAAAGGCAAAGCATTTCTATAATTCAGAGAATATGGAAGAATATTTTACTAACCAGAGTGAAGAAAAACTCTGTTGTTGTCATACAGACTTGTATCCGTAGTTGGCTTACTCACCAGAACTACATTCGCAAAACATACTGCATTTTCAAGATCCAATCGTGTTGGAAGGGCTATATGATAAGAAAACATGCTAGACCTCAGCTGCTTAACCTTCGTAAAAGAATGGAAATGTCCGCTGCTAATGTAAATGAAGAAATGCGACTAATTAACAGATTAGTTGCTGCTCTTTCAGAGCTGCTGGGCTACAAAAGTATCAGTAATATTCGGCACACCTCAGAAACACTGGATAAAGCAACCGAACTTTCTCAGAAATGTTGTGAAACTTTAGTGGATGCTGGTGCAATTGATATATTGCTAAAGCAAATTCAGTTGCTCAACCGAGGGATTCCGGATCAGGTGGTTTTGAAGCATTTGCTTTCCACTATCAGAAATATTGCTCGCTATAAACATCTATCCCTGGTCCTGATCAATACCCCAAAGTCTATGGAGATAATCTTCCAAGAAATGTTGAGGAACAAAAATGAAGGATTTATAATTAGTTGCCAACTGCTGAGGAGAGTCTGCAAAATTCAAGAAGGCCTTCATTCTGTGCGCATGCTGCGTGGCCATATCAAAAAGCTGAATAATCTCTTGCTTACACTCGACAGAAAAGCCAAGTTCCTAGAGAGGGAGGCTCTTTGGAATAAAAACAGAGATCTTATTATGAAAAGGCTCAGAGAAGGCGCATGTCTTATGTCAACGATTGCTGATGAGTAAACCCCTTCAGTATTTTTACTTTTATGGAAAATGAATTCACCATATCAGCATGACCCAAAGAATGATTTTGTAAATTCTGGCATTGCAAATTTATCCAAGCGAGCGCTAGAATGCTATAATTTCTGATTAAAATGAACTAAACTGCAAATGAAAATGTTTTAGGCGTTAAAATGAAATTATGTTTTATCCAGAATTTTCAGGGACTACTGATGCACAAGTGTATGATTGTGGGCTACGGGGTGTAAATGGGCAGGGTCAAGCACGAACCTCAAGTTTGATTCGAACTCATTTTGTAAGTTCAAACTCAGCTCTATAAAAAATAAAACTTTTCAAAGGATAGTTATGCAATAACATTCTTACCA

Network for GWHGAAEX009122

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00307.30	CH	402	490	2.00E-07
PF00612.26	IQ	680	698	0.015
PF00612.26	IQ	758	777	0.038
PF00612.26	IQ	851	869	2.40E-05
PF00612.26	IQ	898	914	0.014
PF00612.26	IQ	1012	1030	0.17
PF00612.26	IQ	1036	1054	0.014

Protein Sequence

>GWHPAAEX009122
MERCRPPERDARAPSTPALLLRDVSNLKTPRPCPRIPYPNPNLASPSSHFFTASKKTPHSSYHTPISSTSHSTFRHRTPSFTASASRSKTARRLNALKIEQTRSARKAQSRREKKVASFARSLRAWLNFLLQNPKACGCKIGFCEADGQPTGSISKGKGKRSVDIRLSVAKPTMTLLDKSLSKVCSLEDLCERMTLHMSSKGCNEVLLMMSQVCKNIDEGRLKMKPHCPLVTDLAVKERAIKTLMCYNPYWLKKGLHILFGGDSLLLNHGDLDEHFLKEFLEKHFLTYAGIARTHKLVGGLYRPGYYEALGKAILKRFLLLSIALDKAKCESSLPINYGVDNIDGGSPLLFNLHSSIKSTRHIIIEFLMDSMHGEGDLLSHLLIMGYKVNYQQSPLCECDFKVKNIFEDLQDGILLCRVVQLLLCNETILSKMVCPSDTPKKKLQNCSTAMKHLKDSGVQMSDSDGFFITATDLVNGEKELTCSLLWNVFICLQVPLLINKTSLLTEIAKIKGTETELMKYDACNEMSLLLCWIQAVCAMQNMEVDGFSSLTDGKALTCLIKFYLGNSVHPSSVEKENKNERNYPPTLLGIEYVQYVTAMLGNYPEWVLHPCDIFDEDEDQKIDERSAVIVLVFLAFRLISTDKLRPCVSLKYPIISGNNVKKLCCSHGEDLARHLSEESSARVIQARYRGFIKRKHFLKMKMAAIFLQSVIRAWLAVRFDCESKHATLICSPLRSTNGIYDRYLLLLIERQKFRKARNAVILIQRYVRAWIKRKQHNSKLMNLKISASEIPGAVEFSYSSCCNITKLEIMLKQSANGDENETLEQQWRAVTKIQEAWKIFQHNIRSKRSHSATKIQSQWRRWLIRKDYLFQVGAIKLIQSVVRSSRAQSAFQLKQLAAIEIQRFIRGQLARTKLLGAYSHEYVTLHRRSYDAISDGFMNNFELRILHYSIVKLQRWWKRLLLHRSRRHAAISIQSIARSWIARRAAAKKRQSISIIQRIWKNILLTRVKKNSVVVIQTCIRSWLTHQNYIRKTYCIFKIQSCWKGYMIRKHARPQLLNLRKRMEMSAANVNEEMRLINRLVAALSELLGYKSISNIRHTSETLDKATELSQKCCETLVDAGAIDILLKQIQLLNRGIPDQVVLKHLLSTIRNIARYKHLSLVLINTPKSMEIIFQEMLRNKNEGFIISCQLLRRVCKIQEGLHSVRMLRGHIKKLNNLLLTLDRKAKFLEREALWNKNRDLIMKRLREGACLMSTIADE

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.270
SRP064423	SRR2545915	Juvenile tuber	1.370
SRP108465	SRR5643513	five period of Gastrodia elata	0.830
	SRR5643514	five period of Gastrodia elata	1.330
	SRR5643515	five period of Gastrodia elata	0.810
	SRR5643524	five period of Gastrodia elata	0.810
	SRR5643525	five period of Gastrodia elata	0.770
	SRR5643528	five period of Gastrodia elata	0.480
	SRR5643658	five period of Gastrodia elata	0.560
	SRR5643659	five period of Gastrodia elata	0.620
	SRR5643660	five period of Gastrodia elata	0.640
	SRR5643661	five period of Gastrodia elata	1.230
	SRR5643662	five period of Gastrodia elata	0.770
	SRR5643663	five period of Gastrodia elata	0.750
	SRR5643664	five period of Gastrodia elata	0.640
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.540
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.450
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.340
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.850
SRP279888	Gastro	Gastrodia elata tuber	1.23
	Juven	Juvenile tuber	1.76
	Mother_Gastro	Mother tuber of Gastrodia elata	1.89
	Mother_Juven	Mother tuber of Juvenile	2.28