Gene detail

Detail information of GWHGAAEX009131/evm.TU.scaffold_237.5

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0724	6.00E-83	Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nr	gi\|672124091\|ref\|XP_008785421.1\|	3.23E-101	PREDICTED: transcription factor DIVARICATA isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	4.00E-81	Transcription factor DIVARICATA
trEMBL	tr\|A0A0A0KC64\|A0A0A0KC64_CUCSA	5.00E-87	Uncharacterized protein {ECO:0000313\|EMBL:KGN47103.1}
TAIR	AT2G38090	6.00E-83	Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000234	57241	59027	+

Transcript Sequence
>GWHTAAEX009131 TATATATATATATATATCAGCTGGCAAGGCGTCATTAAGGCAGAAAGTGAGATGCCTTCCGCCTTTCCTATCTTCGAGCCTCTCTCCGCTCCAAAGCTTTTTCTCCGAAGGTCGGGAGATTTCTTCTTCAGCATTCGCATTATTTTCTTCTTTCAGCAAATTCTCCTTCTCTTCTTTTCTTGCTTTCCTGTTCGATTTGCAGGCACTTTCTTATTCTTCACCGCTCTTTATTATTATTGCTGCGTTTAATTATTCTTAGTTTGTTTTTTGTTCTCGAGCGCAATTTTATTCGATTCCGACCCTTTAGCAATAATTTTCGTTTTTAATCTTCAAAAGTCGATTTGAGCGAGCGTTCTTGTTTTATATGCACCATATTTTGCTTTGAATTTGTTGTATTCGGTAGAATTTCGCCTTTCGTTTTTACCGCCGTACGGAAGAACTTCTTTCCTTTCCGATTATTCGAATTCGTCGAGAATTACGGACACAGATCGAATTACTCGAGCGATTTTTAGGGTTTCATTTACCGGTAGATTTTCGCCCCGATCCGCGGTTAATAGAATCATCTCATACTCGATTTATCATAAAAGGCTGCCGAACCCTAAATCCCCTTCCAGTTATTCCTCCACTGATCTACTTGCTTCGGGTAGTGCAAGTTTTCGTAATCTGAGATCACCTTTCTCCCTTATTTTTCCCCCTTTGGTTAGGGAATCTCTTTACAAGTTTATCTGGAGTTTGGAATTGTCCGGATTCTTCACGGAAGGCTTATAATTCACCGGCATTGCTCATCTCGGGTCCTACTCTTCCATTACCCCTCCCTAAGAATTCCGAAACCGAGCACTATTTATGTTCTCGGTTCAGGGATTCACAAACTAGTGCAGAAATTTATTTAGATGATGACAAACTCAGGCACGGAAGTTCTTCTAAACCCCGCTCCTGCGTATTTCATCGATCCGAGCTGGTTTGTGGGCGAGAACAAATGCGGGAGCTGGACTCAGCAGGAAAACAAGCAGTTCGAGAAGGCTCTCGCCCGCTTCGACAGAGACACTCCGGAAAGATGGCTAATGGTGGCCAGAATGATACCCGGCAAGACAGTGGGCGAAGTCCTCTCCCATTACCACGATTTGGAAGAAGACGTGAGCTTCATAGAAGCAGGCCTCGTCCCCTTCCCTGGCTACAGCTCTTCCTCCATCGCCCTGGACTGGGACAGCGATTTCGAAGCCTTTAAGCCGGAATTCAGTCTCTGCGGCAAGAGATCCGCCAACCGCCTCTCCGATCACGAGCGCAAGAAAGGCGTTCCGTGGACGGAAGAAGAGCACAAGAGATTTCTGATGGGGCTGAAGAAATACGGGAAAGGGGATTGGAGGAACATATCTCGGAATTTCGTGGTGACGAGAACGTCGACGCAGGTGGCCAGCCACGCCCAGAAGTATTTCCTCCGCCTCAACTCCGGCTGGAAGGATAAGAGGAGAGCCAGCATACACGACATCACGACCGTTAATATGGAGGACGAAAGCCCTGCCTCGCCATCGCAGCCGTCCGCAGCCGATGCGAATCGGTACGTTCATCCGCTTTACGACACTCAAACCTACGGCCTGATGCATAGCGCTCCGCGTCTTCTGAGCGATTTCAGCGCTTCTGCCTCTGCTCTAGAATGAAGTATAACCAATCAATCTCCCTGTGTGGATGACGATCATTAGG

Network for GWHGAAEX009131

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.30	Myb_DNA-binding	31	78	2.00E-06
PF00249.30	Myb_DNA-binding	136	180	9.80E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	73.470
SRP064423	SRR2545915	Juvenile tuber	27.400
SRP108465	SRR5643513	five period of Gastrodia elata	28.990
	SRR5643514	five period of Gastrodia elata	32.100
	SRR5643515	five period of Gastrodia elata	18.140
	SRR5643524	five period of Gastrodia elata	25.400
	SRR5643525	five period of Gastrodia elata	57.650
	SRR5643528	five period of Gastrodia elata	35.230
	SRR5643658	five period of Gastrodia elata	37.190
	SRR5643659	five period of Gastrodia elata	23.030
	SRR5643660	five period of Gastrodia elata	27.210
	SRR5643661	five period of Gastrodia elata	17.520
	SRR5643662	five period of Gastrodia elata	20.720
	SRR5643663	five period of Gastrodia elata	26.980
	SRR5643664	five period of Gastrodia elata	28.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	45.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	54.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	46.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	49.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	47.090
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.120
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	42.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	42.210
SRP279888	Gastro	Gastrodia elata tuber	44.47
	Juven	Juvenile tuber	63.54
	Mother_Gastro	Mother tuber of Gastrodia elata	25.63
	Mother_Juven	Mother tuber of Juvenile	27.38