Detail information of GWHGAAEX009132/evm.TU.scaffold_237.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19470Leucine rich repeat proteins, some proteins contain F-box
nrgi|743867604|ref|XP_010905359.1|0PREDICTED: coronatine-insensitive protein 1-like [Elaeis guineensis]
Swissprottr|O04197|COI1_ARATH0Coronatine-insensitive protein 1
trEMBLtr|A0A023VWQ6|A0A023VWQ6_9ASPA0Coronatine-insensitive protein 1 {ECO:0000313|EMBL:AHY19994.1}
TAIRAT2G399400RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002346189685164-
Transcript Sequence

Network for GWHGAAEX009132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
K13463COI-1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.010
SRR2545915Juvenile tuber15.770
SRP108465SRR5643513five period of Gastrodia elata22.870
SRR5643514five period of Gastrodia elata21.360
SRR5643515five period of Gastrodia elata21.190
SRR5643524five period of Gastrodia elata21.870
SRR5643525five period of Gastrodia elata39.730
SRR5643528five period of Gastrodia elata22.030
SRR5643658five period of Gastrodia elata49.170
SRR5643659five period of Gastrodia elata21.550
SRR5643660five period of Gastrodia elata20.200
SRR5643661five period of Gastrodia elata18.680
SRR5643662five period of Gastrodia elata21.890
SRR5643663five period of Gastrodia elata19.480
SRR5643664five period of Gastrodia elata27.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.190
SRR6049655Rhizomagastrodiae_C368-T10_good_114.750
SRR6049656Rhizomagastrodiae_C368-T07_good_125.310
SRR6049657Rhizomagastrodiae_C368-T07_good_129.890
SRR6049658Rhizomagastrodiae_C368-T04_good_135.050
SRR6049659Rhizomagastrodiae_C368-T04_good_139.750
SRR6049660Rhizomagastrodiae_C368-T01_good_129.090
SRR6049661Rhizomagastrodiae_C368-T04_good_131.850
SRR6049662Rhizomagastrodiae_C368-T01_good_121.330
SRR6049663Rhizomagastrodiae_C368-T01_good_127.930
SRR6049664Rhizomagastrodiae_C368-T10_good_122.110
SRR6049665Rhizomagastrodiae_C368-T10_good_122.110
SRP279888GastroGastrodia elata tuber 25.77
JuvenJuvenile tuber34.31
Mother_GastroMother tuber of Gastrodia elata 30.14
Mother_JuvenMother tuber of Juvenile 32.37