Detail information of GWHGAAEX009139/evm.TU.scaffold_237.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04438.00E-93Actin regulatory proteins (gelsolin/villin family)
nrgi|672123985|ref|XP_008785366.1|9.28E-129PREDICTED: villin-1 isoform X2 [Phoenix dactylifera]
Swissprottr|O81643|VILI1_ARATH3.00E-96Villin-1 {ECO:0000303|PubMed:10631247}
trEMBLtr|A0A067FTU1|A0A067FTU1_CITSI4.00E-120Uncharacterized protein {ECO:0000313|EMBL:KDO66867.1}
TAIRAT2G298908.00E-93villin-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000234541067587425+
Transcript Sequence

Network for GWHGAAEX009139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0051015Molecular Functionactin filament binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.250
SRR2545915Juvenile tuber12.050
SRP108465SRR5643513five period of Gastrodia elata11.350
SRR5643514five period of Gastrodia elata15.170
SRR5643515five period of Gastrodia elata13.300
SRR5643524five period of Gastrodia elata13.420
SRR5643525five period of Gastrodia elata6.940
SRR5643528five period of Gastrodia elata6.120
SRR5643658five period of Gastrodia elata6.120
SRR5643659five period of Gastrodia elata7.090
SRR5643660five period of Gastrodia elata7.580
SRR5643661five period of Gastrodia elata6.500
SRR5643662five period of Gastrodia elata7.430
SRR5643663five period of Gastrodia elata7.470
SRR5643664five period of Gastrodia elata6.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.590
SRR6049655Rhizomagastrodiae_C368-T10_good_15.930
SRR6049656Rhizomagastrodiae_C368-T07_good_111.160
SRR6049657Rhizomagastrodiae_C368-T07_good_110.040
SRR6049658Rhizomagastrodiae_C368-T04_good_110.860
SRR6049659Rhizomagastrodiae_C368-T04_good_110.400
SRR6049660Rhizomagastrodiae_C368-T01_good_110.200
SRR6049661Rhizomagastrodiae_C368-T04_good_113.320
SRR6049662Rhizomagastrodiae_C368-T01_good_111.250
SRR6049663Rhizomagastrodiae_C368-T01_good_115.220
SRR6049664Rhizomagastrodiae_C368-T10_good_114.970
SRR6049665Rhizomagastrodiae_C368-T10_good_114.970
SRP279888GastroGastrodia elata tuber 11.84
JuvenJuvenile tuber17.42
Mother_GastroMother tuber of Gastrodia elata 10.43
Mother_JuvenMother tuber of Juvenile 13.41