Detail information of GWHGAAEX009141/evm.TU.scaffold_237.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16072.00E-115Protein transporter of the TRAM (translocating chain-associating membrane) superfamily
nrgi|374082402|gb|AEY81371.1|5.52E-135longevity assurance protein 1-like protein [Gossypium hirsutum]
Swissprottr|Q84QC0|ASCL3_ORYSJ1.00E-126ASC1-like protein 3
trEMBLtr|H6WCP6|H6WCP6_GOSHI2.00E-135Longevity assurance protein 1-like protein {ECO:0000313|EMBL:AEY81371.1}
TAIRAT3G192602.00E-115LAG1 homologue 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000234616804645850+
Transcript Sequence

Network for GWHGAAEX009141

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.15TRAM_LAG1_CLN8652634.30E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K23727CERS5_6, LASS5_6 Metabolic pathways map01100
Sphingolipid metabolismmap00600
Sphingolipid signaling pathwaymap04071

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.200
SRR2545915Juvenile tuber16.120
SRP108465SRR5643513five period of Gastrodia elata14.520
SRR5643514five period of Gastrodia elata14.340
SRR5643515five period of Gastrodia elata16.240
SRR5643524five period of Gastrodia elata14.960
SRR5643525five period of Gastrodia elata22.380
SRR5643528five period of Gastrodia elata23.130
SRR5643658five period of Gastrodia elata20.280
SRR5643659five period of Gastrodia elata15.170
SRR5643660five period of Gastrodia elata15.420
SRR5643661five period of Gastrodia elata15.570
SRR5643662five period of Gastrodia elata15.680
SRR5643663five period of Gastrodia elata14.760
SRR5643664five period of Gastrodia elata10.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.780
SRR6049655Rhizomagastrodiae_C368-T10_good_115.550
SRR6049656Rhizomagastrodiae_C368-T07_good_117.650
SRR6049657Rhizomagastrodiae_C368-T07_good_115.080
SRR6049658Rhizomagastrodiae_C368-T04_good_116.490
SRR6049659Rhizomagastrodiae_C368-T04_good_114.980
SRR6049660Rhizomagastrodiae_C368-T01_good_114.020
SRR6049661Rhizomagastrodiae_C368-T04_good_112.870
SRR6049662Rhizomagastrodiae_C368-T01_good_118.600
SRR6049663Rhizomagastrodiae_C368-T01_good_116.620
SRR6049664Rhizomagastrodiae_C368-T10_good_119.910
SRR6049665Rhizomagastrodiae_C368-T10_good_119.910
SRP279888GastroGastrodia elata tuber 16.16
JuvenJuvenile tuber11.90
Mother_GastroMother tuber of Gastrodia elata 25.33
Mother_JuvenMother tuber of Juvenile 15.15