Detail information of GWHGAAEX009149/evm.TU.scaffold_238.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00481.00E-80Transcription factor, Myb superfamily
nrgi|743818210|ref|XP_010931159.1|1.09E-106PREDICTED: trichome differentiation protein GL1-like [Elaeis guineensis]
Swissprottr|Q9FDW1|MYB44_ARATH2.00E-51Transcription factor MYB44
trEMBLtr|K7M582|K7M582_SOYBN2.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06870.2}
TAIRAT3G557301.00E-80myb domain protein 109

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002438020687102+
Transcript Sequence

Network for GWHGAAEX009149

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding741194.90E-18
PF00249.30Myb_DNA-binding1261701.20E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.890
SRR2545915Juvenile tuber14.620
SRP108465SRR5643513five period of Gastrodia elata9.190
SRR5643514five period of Gastrodia elata10.620
SRR5643515five period of Gastrodia elata9.360
SRR5643524five period of Gastrodia elata9.350
SRR5643525five period of Gastrodia elata17.570
SRR5643528five period of Gastrodia elata14.770
SRR5643658five period of Gastrodia elata16.160
SRR5643659five period of Gastrodia elata13.150
SRR5643660five period of Gastrodia elata16.840
SRR5643661five period of Gastrodia elata15.120
SRR5643662five period of Gastrodia elata16.210
SRR5643663five period of Gastrodia elata16.930
SRR5643664five period of Gastrodia elata18.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.910
SRR6049655Rhizomagastrodiae_C368-T10_good_18.250
SRR6049656Rhizomagastrodiae_C368-T07_good_19.660
SRR6049657Rhizomagastrodiae_C368-T07_good_115.190
SRR6049658Rhizomagastrodiae_C368-T04_good_114.820
SRR6049659Rhizomagastrodiae_C368-T04_good_117.060
SRR6049660Rhizomagastrodiae_C368-T01_good_114.080
SRR6049661Rhizomagastrodiae_C368-T04_good_112.950
SRR6049662Rhizomagastrodiae_C368-T01_good_110.030
SRR6049663Rhizomagastrodiae_C368-T01_good_112.570
SRR6049664Rhizomagastrodiae_C368-T10_good_19.610
SRR6049665Rhizomagastrodiae_C368-T10_good_19.610
SRP279888GastroGastrodia elata tuber 11.44
JuvenJuvenile tuber13.40
Mother_GastroMother tuber of Gastrodia elata 16.83
Mother_JuvenMother tuber of Juvenile 12.84