Gene detail

Detail information of GWHGAAEX009151/evm.TU.scaffold_238.5

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3058	3.00E-140	Uncharacterized conserved protein
nr	gi\|695081055\|ref\|XP_009388022.1\|	7.77E-161	PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q5N7A7\|IPCS_ORYSJ	4.00E-156	Phosphatidylinositol:ceramide inositolphosphotransferase
trEMBL	tr\|M0UBI8\|M0UBI8_MUSAM	3.00E-161	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP22800_001}
TAIR	AT3G54020	3.00E-140	Arabidopsis Inositol phosphorylceramide synthase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000243	88594	95656	+

Transcript Sequence
>GWHTAAEX009151 CACAAATTTAAATTATTCGTTAAGCACTATATTATTTTTCGCTGATAACATATTTATTACAAATCCCACTATTTTAAAACATTTTAGATGTTAATTATGAAAGATTTTCTTACGTAAGATTCCGTCAACAATCAACGTTTGTTGGTCTTCCAGAAAAATACCTTGCCGTGTTATGTTTTCTGCTTTTGCACGTCCCGGCTGCTTGACCCATTTGGATTCAACAAGCCTAAGGAAAAGGAAGAAGCAGGAGCCCTTCCTCTTTTGGTCTCTCTCTCTAGATCTTTTGGCCTACAGAAGCATGCGACTGGTCAGATAAAAGACCTCGCTTTTCATAAAATCGACTGTAATAACACCACAAGAAGAAAGACGAAATTTGCCGTGAGGTCTCCGTGTGCTTGGGAATCAATTTCAGAACAGCTGCACCATAGCTTCATTCATCTTTTTGCGTGGATCATTTGAACAGAGCGAGAACTTGTAGGCAGTCGGTTTGTGGCGCAAGTGAACCGAGGTATGATGATATGATCTGAAGGTCGACGTCGCTAATCAGTACGATGACTTACGCTGGACGCGAATCTTCTAAGCTATGGAAAAAGATTTGTATGGAGACGTATGTGGAGCTACAGCTTCTGGGGGAGAAATGGAAGCTTCTATTGGCTGGACTCGTATTTCAGTATATCCATGGTTTGGCTACTAGAGGTGTACACTATTTACATCGTCCCGGGCCAGTGCTTCGAGATCTCGGATTTGATGCTTTACCAGAACTTGGAATACAAAGAGCATACCTTAGTGAATCCCTTTTCTCTGTTATCTTTTTCTCCTTCATATTGTGGTCATTTCATCCGTTCGTATGCCATACTAAGCGAGTCTACACTGTTCTACTCTGGATCAGAGTGTTCGCATGTCTAGTGATTTGCCAGACTCTTCGGATCTTCACATTCTATTCTACCATCCTGCCGGGCCCCAACTATCACTGTCGTGAGGGATCACCTCTTGCCAGGTTGCCCCATCCTCATAGCATACTTGAAGTTCTCCTTATAAATTTTCCACGAGGACTCCTGTATGGATGTGGTGACTTGATATTTTCATCTCACATGATATTTTCTTTAGTTTTTGTGCGAACATATTACAAGTATGGTTCGAAAAGTTTCATCAAGATGCTTGCTTGGTTGATGGCTATAGTGCAAAGTCTGCTTATAGTCGCCTCTCGGAAACACTACACTGTTGATGTGGTTGTTGCATGGTATACTGTGAATTTGGTAGTATTCTTTGTTGACACAAAATTACCAGATATGTCTGATCGTTCCGGTGGAAACCAGCCTATAAGTCTTCCTTTGAGCTTAAGAGAAAAGGAAAGCAAATTCAGGGAAGAGAACCACAAACTTTTGAATGGGCAGTTAGAAAACCACAAACTGTTGAATGGGCATTTAGAGGATACTGCAGATTGGAGGCAAAGAACCCAAAACAATGCCCATCCTGATGCAGCAATGAATGGGGTGTATACAACAACACAATGAGAGCGCATACAAGGAGTGCTCGGTGAGGTACACAGAGGAGTTCAGTAGAGACAGGCTCGCAATTTTGTAGTTTTTGTAATTGCTCGATAATTCTTTATTTCTTAAATTTAGGGTTTTTTTTCAAGTATAATTTGACGTTATTATTAGAAACAATTATTCATGAAATGTATCATTTATTGTATATAGCACAGCATGTCTGTTGGTGCAAACAACTTATGTGAATAAGTTCGTTTCTACATACAATTTCATCTCTGCTAAATGGATACGTTGAACGGTAGTAAATTTTAGTAATTAGCTTTCAAAAATATGAAATATTTTTTTTTCTCAGAAATAAAC

Network for GWHGAAEX009151

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14360.5	PAP2_C	171	239	1.20E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	33.910
SRP064423	SRR2545915	Juvenile tuber	40.350
SRP108465	SRR5643513	five period of Gastrodia elata	5.550
	SRR5643514	five period of Gastrodia elata	8.030
	SRR5643515	five period of Gastrodia elata	50.300
	SRR5643524	five period of Gastrodia elata	9.890
	SRR5643525	five period of Gastrodia elata	30.630
	SRR5643528	five period of Gastrodia elata	140.240
	SRR5643658	five period of Gastrodia elata	19.370
	SRR5643659	five period of Gastrodia elata	105.540
	SRR5643660	five period of Gastrodia elata	53.210
	SRR5643661	five period of Gastrodia elata	96.220
	SRR5643662	five period of Gastrodia elata	97.520
	SRR5643663	five period of Gastrodia elata	75.530
	SRR5643664	five period of Gastrodia elata	147.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.060
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	20.690
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	42.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.090
SRP279888	Gastro	Gastrodia elata tuber	17.41
	Juven	Juvenile tuber	6.36
	Mother_Gastro	Mother tuber of Gastrodia elata	81.38
	Mother_Juven	Mother tuber of Juvenile	117.56